RNA–Protein interactions for RNA: ENST00000488013.1

HDLBP-242, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 651 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-242ENST00000488013 SDHBP21912 280 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 CDH3P22223 829 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 CD1CP29017 333 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 AHRP35869 848 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 PIK3CBP42338 1070 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 GYS2P54840 703 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 OR1D5P58170 312 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 ERVPABLB-1P60509 514 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 RPS15AP62244 130 aaKnown RBP10.62□□□□□ -0.71
HDLBP-242ENST00000488013 NHLH1Q02575 133 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 TRA2AQ13595 282 aaKnown RBP eCLIP10.62□□□□□ -0.71
HDLBP-242ENST00000488013 DOC2AQ14183 400 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 FBXO48Q5FWF7 155 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 MANEAQ5SRI9 462 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 KANK2Q63ZY3 851 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 FRG2Q64ET8 278 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 ZNF425Q6IV72 752 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 IRGCQ6NXR0 463 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 GUSBP11Q6P575 273 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 TMEM71Q6P5X7 295 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 PRSS42Q7Z5A4 293 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 ADCK2Q7Z695 626 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 SYVN1Q86TM6 617 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 FAM129CQ86XR2 697 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 SFTPA2Q8IWL1 248 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 PARP9Q8IXQ6 854 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 LAS2Q8IYD9 372 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 C2orf73Q8N5S3 287 aaPredicted RBP10.62□□□□□ -0.71
HDLBP-242ENST00000488013 ZNF454Q8N9F8 522 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 Q8N9G6 341 aaPredicted RBP10.62□□□□□ -0.71
HDLBP-242ENST00000488013 OR4D9Q8NGE8 314 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 BAHD1Q8TBE0 780 aaPredicted RBP10.62□□□□□ -0.71
HDLBP-242ENST00000488013 NETO1Q8TDF5 533 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 NCSTNQ92542 709 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 RSC1A1Q92681 617 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 METTL2AQ96IZ6 378 aaKnown RBP10.62□□□□□ -0.71
HDLBP-242ENST00000488013 PRAP1Q96NZ9 151 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 FRG2BQ96QU4 278 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 CCDC3Q9BQI4 270 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 PLCD4Q9BRC7 762 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 CENPKQ9BS16 269 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 DPH7Q9BTV6 452 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 ACAT2Q9BWD1 397 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 LRRN3Q9H3W5 708 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 CAAP1Q9H8G2 361 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 PARD6AQ9NPB6 346 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 ABCF3Q9NUQ8 709 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 RIC8BQ9NVN3 520 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 SEMA5BQ9P283 1151 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 PPT2Q9UMR5 302 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 APOBEC2Q9Y235 224 aaKnown RBP10.62□□□□□ -0.71
HDLBP-242ENST00000488013 U3KQA8 63 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 MUC6Q6W4X9 2439 aa10.62□□□□□ -0.71
HDLBP-242ENST00000488013 MN1Q10571 1320 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 DOCK9Q9BZ29 2069 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 PIKFYVEQ9Y2I7 2098 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 SERTM1A2A2V5 107 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 OR2A25A4D2G3 310 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 KRT87PA6NCN2 255 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 SLC28A1O00337 649 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 FOXE1O00358 373 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 UBFD1O14562 309 aaKnown RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 ITM2AO43736 263 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 SH3BP5O60239 455 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 SRPX2O60687 465 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 CBFA2T3O75081 653 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 RPLP0P05388 317 aaKnown RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 CAPN1P07384 714 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 ANKRD34CP0C6C1 535 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 CDH1P12830 882 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 PEBP1P30086 187 aaKnown RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 GRIA3P42263 894 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 ARL4DP49703 201 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 CSNK1G2P78368 415 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 IRX1P78414 480 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 REEP5Q00765 189 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 SLBPQ14493 270 aaKnown RBP eCLIP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 ZRSR2Q15696 482 aaKnown RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 CPSF6Q16630 551 aaKnown RBP eCLIP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 AMZ1Q400G9 498 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 TMTC4Q5T4D3 741 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 LETMD1Q6P1Q0 360 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 FIGLAQ6QHK4 219 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 FAM47EQ6ZV65 393 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 GLRX5Q86SX6 157 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 ZNF761Q86XN6 746 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 ZNF655Q8N720 491 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 ZNF781Q8N8C0 355 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 CDYL2Q8N8U2 506 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 TRPV3Q8NET8 790 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 FLVCR1-AS1Q8TAF5 88 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 JPH3Q8WXH2 748 aaPredicted RBP10.61□□□□□ -0.71
HDLBP-242ENST00000488013 NLNQ9BYT8 704 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 RHBGQ9H310 441 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 BRF2Q9HAW0 419 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 PRM3Q9NNZ6 103 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 PDE7BQ9NP56 450 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 SLCO1B3Q9NPD5 702 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 FGFR1OP2Q9NVK5 253 aa10.61□□□□□ -0.71
HDLBP-242ENST00000488013 GEMIN8Q9NWZ8 242 aaKnown RBP10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms