RNA–Protein interactions for RNA: ENST00000487939.1

PTEN-204, Transcript of phosphatase and tensin homolog, humanhuman

TSL 3

Gene PTEN, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTEN-204ENST00000487939 RBM4BQ9BQ04 359 aaKnown RBP3.8□□□□□ -1.8
PTEN-204ENST00000487939 SDCBP2Q9H190 292 aa3.8□□□□□ -1.8
PTEN-204ENST00000487939 UPF3AQ9H1J1 476 aaKnown RBP3.8□□□□□ -1.8
PTEN-204ENST00000487939 MED20Q9H944 212 aa3.8□□□□□ -1.8
PTEN-204ENST00000487939 DNAJC4Q9NNZ3 241 aa3.8□□□□□ -1.8
PTEN-204ENST00000487939 PFDN4Q9NQP4 134 aa3.8□□□□□ -1.8
PTEN-204ENST00000487939 NFKBIL1Q9UBC1 381 aaPredicted RBP3.8□□□□□ -1.8
PTEN-204ENST00000487939 POLLQ9UGP5 575 aa3.8□□□□□ -1.8
PTEN-204ENST00000487939 A0A087WUV0 522 aaPredicted RBP3.79□□□□□ -1.8
PTEN-204ENST00000487939 SNURFLB1AK76 121 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 CCDC188H7C350 402 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 FPGTO14772 594 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 MOCS3O95396 460 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 ATP1B1P05026 303 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 UGT1A4P22310 534 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 ACAT1P24752 427 aaKnown RBP3.79□□□□□ -1.8
PTEN-204ENST00000487939 CD27P26842 260 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 CDC25CP30307 473 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 GSCP56915 257 aaPredicted RBP3.79□□□□□ -1.8
PTEN-204ENST00000487939 RASGEF1BQ0VAM2 473 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 NONOQ15233 471 aaKnown RBP eCLIP3.79□□□□□ -1.8
PTEN-204ENST00000487939 MTHFSDQ2M296 383 aaKnown RBP3.79□□□□□ -1.8
PTEN-204ENST00000487939 HYAL4Q2M3T9 481 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 GPR33Q49SQ1 333 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 KLHDC1Q8N7A1 406 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 OR5T2Q8NGG2 359 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 ZNF519Q8TB69 540 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 PIK3R3Q92569 461 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 PGM2Q96G03 612 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 ZNF486Q96H40 463 aaPredicted RBP3.79□□□□□ -1.8
PTEN-204ENST00000487939 SERINC2Q96SA4 455 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 BAG1Q99933 345 aaPredicted RBP3.79□□□□□ -1.8
PTEN-204ENST00000487939 CABLES2Q9BTV7 478 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 GTPBP2Q9BX10 602 aaKnown RBP3.79□□□□□ -1.8
PTEN-204ENST00000487939 UBXN6Q9BZV1 441 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 FZD8Q9H461 694 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 ACTL8Q9H568 366 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 SPHK2Q9NRA0 654 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 ASIC3Q9UHC3 531 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 ELF5Q9UKW6 265 aaPredicted RBP3.79□□□□□ -1.8
PTEN-204ENST00000487939 PA2G4Q9UQ80 394 aaKnown RBP3.79□□□□□ -1.8
PTEN-204ENST00000487939 SELENOKQ9Y6D0 94 aa3.79□□□□□ -1.8
PTEN-204ENST00000487939 IL16Q14005 1332 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 A0A1W2PR80 420 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 DKC1O60832 514 aaKnown RBP eCLIP3.78□□□□□ -1.8
PTEN-204ENST00000487939 SORBS2O94875 1100 aaKnown RBP3.78□□□□□ -1.8
PTEN-204ENST00000487939 DUS4LO95620 317 aaKnown RBP3.78□□□□□ -1.8
PTEN-204ENST00000487939 IGHEP01854 428 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 EPORP19235 508 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 PRKACGP22612 351 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 ELAVL4P26378 380 aaKnown RBP3.78□□□□□ -1.8
PTEN-204ENST00000487939 CSNK2BP67870 215 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 CACNG1Q06432 222 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 MZT1Q08AG7 82 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 CDH18Q13634 790 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 PTPN14Q15678 1187 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 TAB1Q15750 504 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 EXT1Q16394 746 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 PTGISQ16647 500 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 FAM174BQ3ZCQ3 159 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 C1orf141Q5JVX7 400 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 TMED8Q6PL24 325 aaPredicted RBP3.78□□□□□ -1.8
PTEN-204ENST00000487939 PPP1R21Q6ZMI0 780 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 Q6ZRP5 223 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 C11orf57Q6ZUT1 292 aaPredicted RBP3.78□□□□□ -1.8
PTEN-204ENST00000487939 IL17RELQ6ZVW7 336 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 GTSCR1Q86UQ5 136 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 AMIGO1Q86WK6 493 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 RCOR2Q8IZ40 523 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 IQUBQ8NA54 791 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 NUP37Q8NFH4 326 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 SEPT1Q8WYJ6 367 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 C18orf12Q96KH6 178 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 SPATA33Q96N06 139 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 BTBD9Q96Q07 612 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 CDCA3Q99618 268 aaPredicted RBP3.78□□□□□ -1.8
PTEN-204ENST00000487939 TDRD1Q9BXT4 1180 aaKnown RBP3.78□□□□□ -1.8
PTEN-204ENST00000487939 ANKRD2Q9GZV1 360 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 PRDM4Q9UKN5 801 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 LIPGQ9Y5X9 500 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 CSNK1G3Q9Y6M4 447 aa3.78□□□□□ -1.8
PTEN-204ENST00000487939 TSPY2A6NKD2 308 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 KRTAP16-1A8MUX0 517 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 FDPSP14324 419 aaKnown RBP3.77□□□□□ -1.81
PTEN-204ENST00000487939 SFTPDP35247 375 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 HNF4AP41235 474 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 XGP55808 180 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 MTCP1P56278 107 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 TMEM50BP56557 158 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 ZNF273Q14593 569 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 FASTKD3Q14CZ7 662 aaKnown RBP3.77□□□□□ -1.81
PTEN-204ENST00000487939 NECTIN1Q15223 517 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 RBBP7Q16576 425 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 LACTB2Q53H82 288 aaPredicted RBP3.77□□□□□ -1.81
PTEN-204ENST00000487939 C2CD6Q53TS8 623 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 FGD3Q5JSP0 725 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 DOK6Q6PKX4 331 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 CHMP1BQ7LBR1 199 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 ANKRD13CQ8N6S4 541 aa3.77□□□□□ -1.81
PTEN-204ENST00000487939 KIF18AQ8NI77 898 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms