RNA–Protein interactions for RNA: ENST00000487294.1

R3HDM1-218, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 587 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-218ENST00000487294 KLHL41O60662 606 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 TMEM63AO94886 807 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 GASTP01350 101 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 FTLP02792 175 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 MMP2P08253 660 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 TCF4P15884 667 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 IDSP22304 550 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 ADSLP30566 484 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 HADHAP40939 763 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 MAPK9P45984 424 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 PPM1FP49593 454 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 CCL11P51671 97 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 VAV2P52735 878 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 HSD11B2P80365 405 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 PDE1BQ01064 536 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 DSC2Q02487 901 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 SLC25A11Q02978 314 aaKnown RBP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 NIPAL4Q0D2K0 466 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 GPS2Q13227 327 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 SMN1Q16637 294 aaKnown RBP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 ZNF789Q5FWF6 425 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 ZNF569Q5MCW4 686 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 PLEKHS1Q5SXH7 462 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 CCDC183Q5T5S1 534 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 VWA5B1Q5TIE3 1220 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 RBM43Q6ZSC3 357 aaKnown RBP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 LRRTM4Q86VH4 590 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 DSELQ8IZU8 1212 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 IQCKQ8N0W5 287 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 SIDT2Q8NBJ9 832 aaKnown RBP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 SLC38A9Q8NBW4 561 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 GPR26Q8NDV2 337 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 BRSK1Q8TDC3 778 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 ZNF483Q8TF39 744 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 NACC2Q96BF6 587 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 FAF2Q96CS3 445 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 ZNF501Q96CX3 271 aaPredicted RBP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 HDAC11Q96DB2 347 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 SNRNP40Q96DI7 357 aaKnown RBP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 C5orf34Q96MH7 638 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 AGAP3Q96P47 875 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 IP6K3Q96PC2 410 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 RUFY1Q96T51 708 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 NUP85Q9BW27 656 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 NUDT9Q9BW91 350 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 ADGRE3Q9BY15 652 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 ISCUQ9H1K1 167 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 OR2AG1Q9H205 316 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 SLAMF7Q9NQ25 335 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 SEPT11Q9NVA2 429 aaKnown RBP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 RBM22Q9NW64 420 aaKnown RBP eCLIP4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 GPR83Q9NYM4 423 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 ENTPD4Q9Y227 616 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 B3GNT3Q9Y2A9 372 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 CELSR1Q9NYQ6 3014 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 CSMD2Q7Z408 3487 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 NF1P21359 2839 aa4.94□□□□□ -1.62
R3HDM1-218ENST00000487294 DIDO1Q9BTC0 2240 aaKnown RBP4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 HEATR9A2RTY3 570 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 ANKUB1A6NFN9 424 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 ARGFXA6NJG6 315 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 OR52A4PA6NMU1 304 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 PDZK1P1A8MUH7 402 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 ZNF487B1APH4 448 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 HNRNPRO43390 633 aaKnown RBP4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 MFSD11O43934 449 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 AKR1B10O60218 316 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 PHF2O75151 1096 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 SCRG1O75711 98 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 KLF7O75840 302 aaPredicted RBP4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 CDK14O94921 469 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 TACC2O95359 2948 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 ZBTB11O95625 1053 aaPredicted RBP4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 IGHEP01854 428 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 HLA-DQB2P05538 268 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 KLK3P07288 261 aaPredicted RBP4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 EBLN1P0CF75 366 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 MTHFD2P13995 350 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 VCLP18206 1134 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 NR4A1P22736 598 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 ITGA3P26006 1051 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 CRHR1P34998 444 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 HMGCLP35914 325 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 HALP42357 657 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 MTNR1BP49286 362 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 PPP1CAP62136 330 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 RPS18P62269 152 aaKnown RBP4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 IFI35P80217 286 aaPredicted RBP4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 UBXN1Q04323 297 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 TMEM115Q12893 351 aaPredicted RBP4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 DPYSL3Q14195 570 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 RPE65Q16518 533 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 INSCQ1MX18 579 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 SMTNL2Q2TAL5 461 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 MST1LQ2TV78 715 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 KRTAP21-3Q3LHN1 58 aa4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 KHDC1Q4VXA5 237 aaKnown RBP4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 PRR30Q53SZ7 412 aaPredicted RBP4.93□□□□□ -1.62
R3HDM1-218ENST00000487294 ZDHHC20Q5W0Z9 365 aa4.93□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms