RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 RBMS3Q6XE24 437 aaKnown RBP4.14□□□□□ -1.75
SMC4-218ENST00000486711 RAPH1Q70E73 1250 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 KLHDC9Q8NEP7 349 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 OR7G3Q8NG95 312 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 NCOA7Q8NI08 942 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 P2RX5Q93086 422 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 HNRNPABQ99729 332 aaKnown RBP4.14□□□□□ -1.75
SMC4-218ENST00000486711 OR2B2Q9GZK3 357 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 LSG1Q9H089 658 aaKnown RBP4.14□□□□□ -1.75
SMC4-218ENST00000486711 SDCBP2Q9H190 292 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 RNF121Q9H920 327 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 IL1RAPL2Q9NP60 686 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 ITM2BQ9Y287 266 aa4.14□□□□□ -1.75
SMC4-218ENST00000486711 SDR42E2A6NKP2 422 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 TMEM150CB9EJG8 249 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 F8VVB4 439 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 F8VWA3 439 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 EPHB6O15197 1021 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 FMO6PO60774 539 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 DFFBO76075 338 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 BAG2O95816 211 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 MOCS2O96007 188 aaPredicted RBP4.13□□□□□ -1.75
SMC4-218ENST00000486711 PAK4O96013 591 aaPredicted RBP4.13□□□□□ -1.75
SMC4-218ENST00000486711 SERPING1P05155 500 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 ITGA3P26006 1051 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 ALDH4A1P30038 563 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 CCND3P30281 292 aaPredicted RBP4.13□□□□□ -1.75
SMC4-218ENST00000486711 SFTPDP35247 375 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 CRIP2P52943 208 aaPredicted RBP4.13□□□□□ -1.75
SMC4-218ENST00000486711 ASIC1P78348 528 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 FOLH1Q04609 750 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 IL10RBQ08334 325 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 HERC3Q15034 1050 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 RBBP5Q15291 538 aaKnown RBP4.13□□□□□ -1.75
SMC4-218ENST00000486711 KBTBD12Q3ZCT8 623 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 LCN1P1Q5VSP4 162 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 SLC35E4Q6ICL7 350 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 FUT10Q6P4F1 479 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 G2E3Q7L622 706 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 TRPT1Q86TN4 253 aaKnown RBP4.13□□□□□ -1.75
SMC4-218ENST00000486711 CROCCP3Q8IVE0 287 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 KBTBD8Q8NFY9 601 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 LRRC8CQ8TDW0 803 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 MAP3K3Q99759 626 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 PDRG1Q9NUG6 133 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 ZKSCAN7Q9P0L1 754 aaPredicted RBP4.13□□□□□ -1.75
SMC4-218ENST00000486711 FBXL5Q9UKA1 691 aa4.13□□□□□ -1.75
SMC4-218ENST00000486711 RUVBL2Q9Y230 463 aaKnown RBP4.13□□□□□ -1.75
SMC4-218ENST00000486711 IGHV4-61A0A0C4DH41 118 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 SMIM1B2RUZ4 78 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 CTDSPLO15194 276 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 SLC22A3O75751 556 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 RAD51DO75771 328 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 GH1P01241 217 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 IGHV4-59P01825 116 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 C8orf89P0DMQ9 161 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 EEF2P13639 858 aaKnown RBP4.12□□□□□ -1.75
SMC4-218ENST00000486711 DARSP14868 501 aaKnown RBP4.12□□□□□ -1.75
SMC4-218ENST00000486711 LHCGRP22888 699 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 CD27P26842 260 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 CDR2Q01850 454 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 OPCMLQ14982 345 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 FUT11Q495W5 492 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 IQCCQ4KMZ1 466 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 PDLIM3Q53GG5 364 aaPredicted RBP4.12□□□□□ -1.75
SMC4-218ENST00000486711 ZNF789Q5FWF6 425 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 LCE1FQ5T754 118 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 ARHGEF16Q5VV41 709 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 FAM46CQ5VWP2 391 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 FAM166AQ6J272 317 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 KRTAP5-1Q6L8H4 278 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 TTC27Q6P3X3 843 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 PIGWQ7Z7B1 504 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 CIARTQ8N365 385 aaPredicted RBP4.12□□□□□ -1.75
SMC4-218ENST00000486711 ZNF713Q8N859 430 aaPredicted RBP4.12□□□□□ -1.75
SMC4-218ENST00000486711 NIPA2Q8N8Q9 360 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 CNBD1Q8NA66 436 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 OLIG1Q8TAK6 271 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 METTL21AQ8WXB1 218 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 PTP4A1Q93096 173 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 SGF29Q96ES7 293 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 GDAP1L1Q96MZ0 367 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 PGLYRP2Q96PD5 576 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 KLHL5Q96PQ7 755 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 DUX3Q96PT4 197 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 MRPL9Q9BYD2 267 aaKnown RBP4.12□□□□□ -1.75
SMC4-218ENST00000486711 PITPNM3Q9BZ71 974 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 RIMS4Q9H426 269 aaPredicted RBP4.12□□□□□ -1.75
SMC4-218ENST00000486711 DNAJC17Q9NVM6 304 aaKnown RBP4.12□□□□□ -1.75
SMC4-218ENST00000486711 SLCO1C1Q9NYB5 712 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 MAN1B1Q9UKM7 699 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 GRID1Q9ULK0 1009 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 R4GN57 208 aa4.12□□□□□ -1.75
SMC4-218ENST00000486711 C13orf42A0A1B0GVH6 325 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 ILVBLA1L0T0 632 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 C17orf105B2RV13 164 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 ZNF197O14709 1029 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 KLF11O14901 512 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 GOSR1O95249 250 aa4.11□□□□□ -1.75
SMC4-218ENST00000486711 ANKRD34CP0C6C1 535 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms