RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 WDR5P61964 334 aaKnown RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 RAB39AQ14964 217 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 HEPACAMQ14CZ8 416 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 HKDC1Q2TB90 917 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 XKR4Q5GH76 650 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 LRRC70Q7Z2Q7 622 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 C1orf52Q8N6N3 182 aaKnown RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 POMGNT2Q8NAT1 580 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 EFCAB11Q9BUY7 163 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 RAB11FIP5Q9BXF6 653 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 ZIM2Q9NZV7 527 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 hCG_2039718K7EN88 272 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 GTPBP1O00178 669 aaKnown RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 MANBAO00462 879 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 ARPC2O15144 300 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 RAP2AP10114 183 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 UNC50Q53HI1 259 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 ZNF57Q68EA5 555 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 LRRTM4Q86VH4 590 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 THOC6Q86W42 341 aaKnown RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 EPHX4Q8IUS5 362 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 TFGQ92734 400 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 ZNF347Q96SE7 839 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 CLSTN3Q9BQT9 956 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 KATNBL1Q9H079 304 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 RSPH9Q9H1X1 276 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 RASSF1Q9NS23 344 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 MRTO4Q9UKD2 239 aaKnown RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 XIRP1Q702N8 1843 aaKnown RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 ZNF701M0R085 212 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 LAMTOR5O43504 91 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 AIREO43918 545 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 ABCB7O75027 752 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 TMCC2O75069 709 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 TNFP01375 233 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 C7P10643 843 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 PRPS1L1P21108 318 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 ALDH4A1P30038 563 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 HMGCLP35914 325 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 UGT2B15P54855 530 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 EEFSECP57772 596 aaKnown RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 TMEM115Q12893 351 aaPredicted RBP10.72□□□□□ -0.69
HDAC6-228ENST00000486227 OR4F3Q6IEY1 312 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 NCEH1Q6PIU2 408 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 KDELC1Q6UW63 502 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 ZCCHC10Q8TBK6 192 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 ZUFSPQ96AP4 578 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 HDHD2Q9H0R4 259 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 OGDHLQ9ULD0 1010 aa10.72□□□□□ -0.69
HDAC6-228ENST00000486227 PHIPQ8WWQ0 1821 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 M0QX08 132 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 SERPINA1P01009 418 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 TFAP2AP05549 437 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 CCNYL3P0C7X3 344 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 EN2P19622 333 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-228ENST00000486227 SLC6A4P31645 630 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 VIPR2P41587 438 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 CCT3P49368 545 aaKnown RBP10.71□□□□□ -0.69
HDAC6-228ENST00000486227 GSK3BP49841 420 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 PRAMEF14Q5SWL7 426 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 PRAMEF13Q5VWM6 474 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 SCML4Q8N228 414 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 CD244Q9BZW8 370 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 DIABLOQ9NR28 239 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 SPATA6Q9NWH7 488 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-228ENST00000486227 EVPLQ92817 2033 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 TFECO14948 347 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-228ENST00000486227 KLF8O95600 359 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-228ENST00000486227 HIST1H2ABP04908 130 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 MAGEA10P43363 369 aaPredicted RBP10.71□□□□□ -0.69
HDAC6-228ENST00000486227 DSC1Q08554 894 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 DPY19L1Q2PZI1 675 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 ZNF805Q5CZA5 627 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 RABL3Q5HYI8 236 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 HIST3H2AQ7L7L0 130 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 RHEBL1Q8TAI7 183 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 SLC9A6Q92581 669 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 HIST1H2ACQ93077 130 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 SLC22A18Q96BI1 424 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 CEP295NLQ96MC4 621 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 TMEM74Q96NL1 305 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 GSDMCQ9BYG8 508 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 BRINP2Q9C0B6 783 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 LMAN2LQ9H0V9 348 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 CLN6Q9NWW5 311 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 ING3Q9NXR8 418 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 DNAJB9Q9UBS3 223 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 EBF1Q9UH73 591 aa10.71□□□□□ -0.69
HDAC6-228ENST00000486227 ECM29Q5VYK3 1845 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 A0A1W2PP18 115 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 TTC34A8MYJ7 566 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 LATS1O95835 1130 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 ADH1BP00325 375 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 FABP3P05413 133 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 C8BP07358 591 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 PHC1P78364 1004 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 ZNF648Q5T619 568 aaPredicted RBP10.71□□□□□ -0.7
HDAC6-228ENST00000486227 CHRDL2Q6WN34 429 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 TSPAN33Q86UF1 283 aa10.71□□□□□ -0.7
HDAC6-228ENST00000486227 DPP10Q8N608 796 aa10.71□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms