RNA–Protein interactions for RNA: ENST00000486039.1

SNX5-213, Transcript of sorting nexin 5, humanhuman

TSL 1 (best) BASIC

Gene SNX5, Length 602 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-213ENST00000486039 ZDHHC24Q6UX98 284 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 ADCK2Q7Z695 626 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 MRGPREQ86SM8 312 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 PLD3Q8IV08 490 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 TMEM102Q8N9M5 508 aaPredicted RBP18.65■□□□□ 0.58
SNX5-213ENST00000486039 FBXO25Q8TCJ0 367 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 PDLIM5Q96HC4 596 aaKnown RBP18.65■□□□□ 0.58
SNX5-213ENST00000486039 SPSB2Q99619 263 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 SLC26A1Q9H2B4 701 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 MLXIPLQ9NP71 852 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 UTP6Q9NYH9 597 aaKnown RBP18.65■□□□□ 0.58
SNX5-213ENST00000486039 CDC23Q9UJX2 597 aa18.65■□□□□ 0.58
SNX5-213ENST00000486039 RUVBL1Q9Y265 456 aaKnown RBP18.65■□□□□ 0.58
SNX5-213ENST00000486039 PCM1Q15154 2024 aa18.64■□□□□ 0.58
SNX5-213ENST00000486039 CXorf49A8MYA2 514 aaPredicted RBP18.64■□□□□ 0.57
SNX5-213ENST00000486039 CEACAM4O75871 244 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 HIST1H2AGP0C0S8 130 aaPredicted RBP18.64■□□□□ 0.57
SNX5-213ENST00000486039 ZNF37AP17032 561 aaPredicted RBP18.64■□□□□ 0.57
SNX5-213ENST00000486039 HIST1H2ADP20671 130 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 TAS2R39P59534 338 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 FOXK1P85037 733 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 ZNF460Q14592 562 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 MUM1Q2TAK8 710 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 HKDC1Q2TB90 917 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 ASB18Q6ZVZ8 466 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 MED25Q71SY5 747 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 PPP1R32Q7Z5V6 425 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 ARHGEF39Q8N4T4 335 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 CSNK1A1LQ8N752 337 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 HIST1H2AHQ96KK5 128 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 HIST1H2AJQ99878 128 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 H2AFJQ9BTM1 129 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 SLC25A23Q9BV35 468 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 SGPP1Q9BX95 441 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 RAB17Q9H0T7 212 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 RHOJQ9H4E5 214 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 WDR54Q9H977 334 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 TMEM184CQ9NVA4 438 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 NSMCE4AQ9NXX6 385 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 CTSFQ9UBX1 484 aa18.64■□□□□ 0.57
SNX5-213ENST00000486039 PCDHGA9Q9Y5G4 932 aaKnown RBP18.64■□□□□ 0.57
SNX5-213ENST00000486039 TCRBV9S1A1TA0A576 114 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 VSTM2BA6NLU5 285 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 C1QAP02745 245 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 EMP3P54852 163 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 GPX6P59796 221 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 KLRB1Q12918 225 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 IGFBP7Q16270 282 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 COLEC12Q5KU26 742 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 PRMT9Q6P2P2 845 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 LCTLQ6UWM7 567 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 SBSNQ6UWP8 590 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 CYS1Q717R9 158 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 CEP97Q8IW35 865 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 FDCSPQ8NFU4 85 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 COL26A1Q96A83 441 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 ALKBH8Q96BT7 664 aaKnown RBP18.63■□□□□ 0.57
SNX5-213ENST00000486039 VPS39Q96JC1 886 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 CABS1Q96KC9 395 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 IP6K3Q96PC2 410 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 PCBD2Q9H0N5 130 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 ZNF304Q9HCX3 659 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 ARL15Q9NXU5 204 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 HECTD1Q9ULT8 2610 aa18.63■□□□□ 0.57
SNX5-213ENST00000486039 CCDC88CQ9P219 2028 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 CYSRT1A8MQ03 144 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 MASP2O00187 686 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 P2RX6O15547 441 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 URI1O94763 535 aaPredicted RBP18.62■□□□□ 0.57
SNX5-213ENST00000486039 ENO2P09104 434 aaPredicted RBP18.62■□□□□ 0.57
SNX5-213ENST00000486039 NPPBP16860 134 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 HRH2P25021 359 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 RRADP55042 308 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 AP1S2P56377 157 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 SNRPNP63162 240 aaKnown RBP18.62■□□□□ 0.57
SNX5-213ENST00000486039 CSNK1G2P78368 415 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 SLC7A5Q01650 507 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 CAV1Q03135 178 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 CKAP4Q07065 602 aaKnown RBP18.62■□□□□ 0.57
SNX5-213ENST00000486039 CAPN13Q6MZZ7 669 aaPredicted RBP18.62■□□□□ 0.57
SNX5-213ENST00000486039 SHISA6Q6ZSJ9 500 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 C3orf62Q6ZUJ4 267 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 OR56A3Q8NH54 315 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 ANKRD49Q8WVL7 239 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 RERGQ96A58 199 aaPredicted RBP18.62■□□□□ 0.57
SNX5-213ENST00000486039 PYCR2Q96C36 320 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 PHACTR1Q9C0D0 580 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 SOX17Q9H6I2 414 aaPredicted RBP18.62■□□□□ 0.57
SNX5-213ENST00000486039 P4HTMQ9NXG6 502 aa18.62■□□□□ 0.57
SNX5-213ENST00000486039 MTO1Q9Y2Z2 717 aaKnown RBP18.62■□□□□ 0.57
SNX5-213ENST00000486039 MED13Q9UHV7 2174 aa18.61■□□□□ 0.57
SNX5-213ENST00000486039 HEATR5BQ9P2D3 2071 aa18.61■□□□□ 0.57
SNX5-213ENST00000486039 FAM159BA6NKW6 160 aa18.61■□□□□ 0.57
SNX5-213ENST00000486039 A6NL46 340 aa18.61■□□□□ 0.57
SNX5-213ENST00000486039 CDC7O00311 574 aa18.61■□□□□ 0.57
SNX5-213ENST00000486039 GUCA1CO95843 209 aa18.61■□□□□ 0.57
SNX5-213ENST00000486039 STATHP02808 62 aa18.61■□□□□ 0.57
SNX5-213ENST00000486039 CCND1P24385 295 aa18.61■□□□□ 0.57
SNX5-213ENST00000486039 PPP1R3AQ16821 1122 aa18.61■□□□□ 0.57
SNX5-213ENST00000486039 GARNL3Q5VVW2 1013 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms