RNA–Protein interactions for RNA: ENST00000485792.1

CUX1-208, Transcript of cut like homeobox 1, humanhuman

TSL 5

Gene CUX1, Length 564 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-208ENST00000485792 TMED2Q15363 201 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 ZKSCAN8Q15776 578 aaPredicted RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 PPP1R3AQ16821 1122 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 C18orf21Q32NC0 220 aaPredicted RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 BBS9Q3SYG4 887 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 LRRC8EQ6NSJ5 796 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 FBXO42Q6P3S6 717 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 CYB5D1Q6P9G0 228 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 PAQR3Q6TCH7 311 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 FAM198BQ6UWH4 519 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 SBSNQ6UWP8 590 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 COX15Q7KZN9 410 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 RNF44Q7L0R7 432 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 GPR155Q7Z3F1 870 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 PPP1R3BQ86XI6 285 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 CEP97Q8IW35 865 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 KLHDC8AQ8IYD2 350 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 CPNE9Q8IYJ1 553 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 DSELQ8IZU8 1212 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 NLGN4XQ8N0W4 816 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 C2orf73Q8N5S3 287 aaPredicted RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 C19orf47Q8N9M1 422 aaKnown RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 PPFIBP2Q8ND30 876 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 NLGN4YQ8NFZ3 816 aaPredicted RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 OR9A1PQ8NGU1 263 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 OR1L3Q8NH93 324 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 MAGEC3Q8TD91 643 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 ADAMTS17Q8TE56 1095 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 ZNF480Q8WV37 535 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 EEF1AKMT1Q8WVE0 214 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 SLC22A18Q96BI1 424 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 UBXN10Q96LJ8 280 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 GPR21Q99679 349 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 RHOJQ9H4E5 214 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 POPDC3Q9HBV1 291 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 PDE7BQ9NP56 450 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 IARS2Q9NSE4 1012 aaKnown RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 TAS2R13Q9NYV9 303 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 MKL2Q9ULH7 1088 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 VWA7Q9Y334 891 aa5.49□□□□□ -1.53
CUX1-208ENST00000485792 MRPS2Q9Y399 296 aaKnown RBP5.49□□□□□ -1.53
CUX1-208ENST00000485792 ESPL1Q14674 2120 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 KCNE1BA0A087WTH5 132 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 C21orf140B9A014 251 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 J3QW42 95 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 KDM1AO60341 852 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 RAD1O60671 282 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 KLF7O75840 302 aaPredicted RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 RASSF9O75901 435 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 TBX6O95947 436 aaPredicted RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 GHRHP01286 108 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 ALBP02768 609 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 MT-ND3P03897 115 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 RAB40ALP0C0E4 278 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 EDN3P14138 238 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 NPPBP16860 134 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 ZNF37AP17032 561 aaPredicted RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 HOXB4P17483 251 aaPredicted RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 CHRM3P20309 590 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 CDH3P22223 829 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 MCM3P25205 808 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 OAS2P29728 719 aaKnown RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 MAGEA4P43358 317 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 CARSP49589 748 aaKnown RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 PLTPP55058 493 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 TAS2R39P59534 338 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 CDKL1Q00532 357 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 RHDQ02161 417 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 CKAP4Q07065 602 aaKnown RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 PCDH1Q08174 1060 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 PRKAA1Q13131 559 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 CALCOCO2Q13137 446 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 SP140Q13342 867 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 TUBB3Q13509 450 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 TTLL9Q3SXZ7 439 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 SYTL3Q4VX76 610 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 HECTD2Q5U5R9 776 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 ADNP2Q6IQ32 1131 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 RHBDD2Q6NTF9 364 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 UGT3A1Q6NUS8 523 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 FAM199XQ6PEV8 388 aaPredicted RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 FIGLAQ6QHK4 219 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 C6orf15Q6UXA7 325 aaPredicted RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 CCDC81Q6ZN84 652 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 C20orf204Q6ZNR8 217 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 PAQR7Q86WK9 346 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 FAM129CQ86XR2 697 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 GALNT12Q8IXK2 581 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 ZBED8Q8IZ13 594 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 CACNA2D3Q8IZS8 1091 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 ESX1Q8N693 406 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 EXD3Q8N9H8 876 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 ABHD11Q8NFV4 315 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 OR2L3Q8NG85 312 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 OR4K1Q8NGD4 311 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 GABPB2Q8TAK5 448 aaPredicted RBP5.48□□□□□ -1.53
CUX1-208ENST00000485792 ISL2Q96A47 359 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 ELMO2Q96JJ3 720 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 CCDC138Q96M89 665 aa5.48□□□□□ -1.53
CUX1-208ENST00000485792 GBP5Q96PP8 586 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms