RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 PYCR2Q96C36 320 aa11.96□□□□□ -0.49
PTCD1-205ENST00000485746 FBXL8Q96CD0 374 aa11.96□□□□□ -0.49
PTCD1-205ENST00000485746 FMO2Q99518 471 aa11.96□□□□□ -0.49
PTCD1-205ENST00000485746 UNKQ9C0B0 810 aaKnown RBP11.96□□□□□ -0.49
PTCD1-205ENST00000485746 SEMA4CQ9C0C4 833 aa11.96□□□□□ -0.49
PTCD1-205ENST00000485746 ACSS2Q9NR19 701 aa11.96□□□□□ -0.49
PTCD1-205ENST00000485746 ZDHHC18Q9NUE0 388 aa11.96□□□□□ -0.49
PTCD1-205ENST00000485746 DMGDHQ9UI17 866 aaKnown RBP11.96□□□□□ -0.49
PTCD1-205ENST00000485746 TLK1Q9UKI8 766 aa11.96□□□□□ -0.49
PTCD1-205ENST00000485746 CDC14AQ9UNH5 594 aa11.96□□□□□ -0.49
PTCD1-205ENST00000485746 KCNMB2Q9Y691 235 aa11.96□□□□□ -0.49
PTCD1-205ENST00000485746 IGKV1-8A0A0C4DH67 115 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 FITM1A5D6W6 292 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 NCF1BA6NI72 391 aaPredicted RBP11.95□□□□□ -0.5
PTCD1-205ENST00000485746 NCF1CA8MVU1 366 aaPredicted RBP11.95□□□□□ -0.5
PTCD1-205ENST00000485746 MKRN2OSH3BPM6 223 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 PEX12O00623 359 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 PRPF4O43172 522 aaKnown RBP eCLIP11.95□□□□□ -0.5
PTCD1-205ENST00000485746 RFPL1O75677 317 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 FAM155BO75949 473 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 S100BP04271 92 aaPredicted RBP11.95□□□□□ -0.5
PTCD1-205ENST00000485746 CAPN1P07384 714 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 NCF1P14598 390 aaPredicted RBP11.95□□□□□ -0.5
PTCD1-205ENST00000485746 CCL11P51671 97 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 CCR8P51685 355 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 RAB10P61026 200 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 RPS15AP62244 130 aaKnown RBP11.95□□□□□ -0.5
PTCD1-205ENST00000485746 OCA2Q04671 838 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 CSHL1Q14406 222 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 SSPNQ14714 243 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 TSNQ15631 228 aaKnown RBP11.95□□□□□ -0.5
PTCD1-205ENST00000485746 ZNF385CQ66K41 422 aaPredicted RBP11.95□□□□□ -0.5
PTCD1-205ENST00000485746 ZNF425Q6IV72 752 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 OVCH1Q7RTY7 1134 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 ADAMTSL2Q86TH1 951 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 ZNF843Q8N446 348 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 SPATA6LQ8N4H0 392 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 ANKRD49Q8WVL7 239 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 ANKRD7Q92527 254 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 PTERQ96BW5 349 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 ZNF285Q96NJ3 590 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 CYTH2Q99418 400 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 GPR22Q99680 433 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 SGPP1Q9BX95 441 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 DERL2Q9GZP9 239 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 SLC25A18Q9H1K4 315 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 ZNF304Q9HCX3 659 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 PRM3Q9NNZ6 103 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 G3BP2Q9UN86 482 aaKnown RBP11.95□□□□□ -0.5
PTCD1-205ENST00000485746 OARD1Q9Y530 152 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 IKBKGQ9Y6K9 419 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 AHCTF1Q8WYP5 2266 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 CFAP47Q6ZTR5 3102 aa11.95□□□□□ -0.5
PTCD1-205ENST00000485746 CELSR3Q9NYQ7 3312 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 FEZF1A0PJY2 475 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 ACSL3O95573 720 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 STATHP02808 62 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 SERPIND1P05546 499 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 FBLP22087 321 aaKnown RBP11.94□□□□□ -0.5
PTCD1-205ENST00000485746 CRABP2P29373 138 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 PMS2P54278 862 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 RRADP55042 308 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 ATP6V0D1P61421 351 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 RELAQ04206 551 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 EFTUD2Q15029 972 aaKnown RBP eCLIP11.94□□□□□ -0.54e-7■■■□□ 19.2
PTCD1-205ENST00000485746 HKDC1Q2TB90 917 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 PRMT9Q6P2P2 845 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 SBSNQ6UWP8 590 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 ZNF605Q86T29 641 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 TBC1D1Q86TI0 1168 aaPredicted RBP11.94□□□□□ -0.5
PTCD1-205ENST00000485746 THOC6Q86W42 341 aaKnown RBP11.94□□□□□ -0.5
PTCD1-205ENST00000485746 GPSM1Q86YR5 675 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 IFT20Q8IY31 132 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 OR56A3Q8NH54 315 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.94□□□□□ -0.5
PTCD1-205ENST00000485746 FKBP10Q96AY3 582 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 THAP11Q96EK4 314 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 MMABQ96EY8 250 aaPredicted RBP11.94□□□□□ -0.5
PTCD1-205ENST00000485746 IP6K3Q96PC2 410 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 OR2A5Q96R48 311 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 ZNF71Q9NQZ8 489 aaPredicted RBP11.94□□□□□ -0.5
PTCD1-205ENST00000485746 NINJ2Q9NZG7 142 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 CD274Q9NZQ7 290 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 TUBD1Q9UJT1 453 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 IKZF3Q9UKT9 509 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 RNF112Q9ULX5 631 aa11.94□□□□□ -0.5
PTCD1-205ENST00000485746 RUVBL1Q9Y265 456 aaKnown RBP11.94□□□□□ -0.5
PTCD1-205ENST00000485746 PTPRQQ9UMZ3 2332 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 A6NL46 340 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 OR1F1O43749 312 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 H2AFYO75367 372 aaKnown RBP11.93□□□□□ -0.5
PTCD1-205ENST00000485746 WDR47O94967 919 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 IGHEP01854 428 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 ALBP02768 609 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 INHBAP08476 426 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 RHOXF2BP0C7M4 288 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 NPPBP16860 134 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 ITGAXP20702 1163 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 AVPR1BP47901 424 aa11.93□□□□□ -0.5
PTCD1-205ENST00000485746 HNMTP50135 292 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms