RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 EML4Q9HC35 981 aaKnown RBP16.89■□□□□ 0.29
CHMP3-207ENST00000485465 MID1IP1Q9NPA3 183 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 ZNF225Q9UK10 706 aa16.89■□□□□ 0.29
CHMP3-207ENST00000485465 IGHV5-51A0A0C4DH38 117 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 IGHV5-10-1A0A0J9YXX1 117 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 SPAARA0A1B0GVQ0 90 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 OR2A25A4D2G3 310 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 POLR3GO15318 223 aaPredicted RBP16.88■□□□□ 0.29
CHMP3-207ENST00000485465 TOX3O15405 576 aaPredicted RBP16.88■□□□□ 0.29
CHMP3-207ENST00000485465 UGDHO60701 494 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 SNNO75324 88 aaPredicted RBP16.88■□□□□ 0.29
CHMP3-207ENST00000485465 LYPLA1O75608 230 aaPredicted RBP16.88■□□□□ 0.29
CHMP3-207ENST00000485465 ESRRBO95718 433 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 HSPA4LO95757 839 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 CDK4P11802 303 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 CEACAM1P13688 526 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 CD22P20273 847 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 GYS2P54840 703 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 INSM1Q01101 510 aaPredicted RBP16.88■□□□□ 0.29
CHMP3-207ENST00000485465 LAPTM5Q13571 262 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 ZIC1Q15915 447 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 LETMD1Q6P1Q0 360 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 ADCK2Q7Z695 626 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 CUZD1Q86UP6 607 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 DCBLD1Q8N8Z6 715 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 C19orf47Q8N9M1 422 aaKnown RBP16.88■□□□□ 0.29
CHMP3-207ENST00000485465 OR4F6Q8NGB9 312 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 GRAMD1AQ96CP6 724 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 MAGEB10Q96LZ2 347 aaPredicted RBP16.88■□□□□ 0.29
CHMP3-207ENST00000485465 AIF1LQ9BQI0 150 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 EFCAB11Q9BUY7 163 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 SHCBP1LQ9BZQ2 653 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 C20orf27Q9GZN8 174 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 THAP1Q9NVV9 213 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 GEMIN8Q9NWZ8 242 aaKnown RBP16.88■□□□□ 0.29
CHMP3-207ENST00000485465 RNF11Q9Y3C5 154 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 RP1P56715 2156 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 ASXL3Q9C0F0 2248 aa16.88■□□□□ 0.29
CHMP3-207ENST00000485465 RIF1Q5UIP0 2472 aaKnown RBP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 A8MU76 341 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 GIPC1O14908 333 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 NRP2O60462 931 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 PRAMEF10O60809 474 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 DKK1O94907 266 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 OR4F21O95013 312 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 SNUPNO95149 360 aaKnown RBP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 ZBTB11O95625 1053 aaPredicted RBP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 THRAP10827 490 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 CXCR2P25025 360 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 HNF4AP41235 474 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 SIM1P81133 766 aaPredicted RBP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 REEP5Q00765 189 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 MEF2AQ02078 507 aaPredicted RBP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 ZFP36L1Q07352 338 aaKnown RBP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 SLBPQ14493 270 aaKnown RBP eCLIP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 RSPO4Q2I0M5 234 aaPredicted RBP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 GGTA1PQ4G0N0 100 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 TTC19Q6DKK2 380 aaPredicted RBP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 GRHL2Q6ISB3 625 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 RBM44Q6ZP01 1051 aaKnown RBP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 RGS9BPQ6ZS82 235 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 ARHGAP22Q7Z5H3 698 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 MYLK4Q86YV6 388 aaPredicted RBP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 SLITRK4Q8IW52 837 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 KLHL6Q8WZ60 621 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 TCTN2Q96GX1 697 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 CCDC74BQ96LY2 380 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 SORT1Q99523 831 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 SPNS1Q9H2V7 528 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 TNFRSF12AQ9NP84 129 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 TRPS1Q9UHF7 1281 aa16.87■□□□□ 0.29
CHMP3-207ENST00000485465 APOBEC2Q9Y235 224 aaKnown RBP16.87■□□□□ 0.29
CHMP3-207ENST00000485465 KCNE1BA0A087WTH5 132 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 HAT1O14929 419 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 ENO1P06733 434 aaKnown RBP16.86■□□□□ 0.29
CHMP3-207ENST00000485465 ANKRD34CP0C6C1 535 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 FTH1P19P0C7X4 201 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 HGFP14210 728 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 JUPP14923 745 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 SDHBP21912 280 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 GRK3P35626 688 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 NOVA1P51513 510 aaKnown RBP16.86■□□□□ 0.29
CHMP3-207ENST00000485465 OCRLQ01968 901 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 RELAQ04206 551 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 HIST2H2ACQ16777 129 aaPredicted RBP16.86■□□□□ 0.29
CHMP3-207ENST00000485465 PAGE2BQ5JRK9 111 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 CDCP2Q5VXM1 449 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 HIST2H2AA3Q6FI13 130 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 FBXO42Q6P3S6 717 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 DHRS13Q6UX07 377 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 KMT5CQ86Y97 462 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 KRT78Q8N1N4 520 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 ZNF740Q8NDX6 193 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 SLC41A2Q96JW4 573 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 PITHD1Q9GZP4 211 aaPredicted RBP16.86■□□□□ 0.29
CHMP3-207ENST00000485465 CHRNA10Q9GZZ6 450 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 ILKAPQ9H0C8 392 aaPredicted RBP16.86■□□□□ 0.29
CHMP3-207ENST00000485465 ZNF768Q9H5H4 540 aaKnown RBP16.86■□□□□ 0.29
CHMP3-207ENST00000485465 CCDC134Q9H6E4 229 aa16.86■□□□□ 0.29
CHMP3-207ENST00000485465 NT5DC2Q9H857 520 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms