RNA–Protein interactions for RNA: ENST00000485080.6

SREBF1-213, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 1,230 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-213ENST00000485080 PCDHGA4Q9Y5G9 962 aa17.02■□□□□ 0.32
SREBF1-213ENST00000485080 SMG1Q96Q15 3661 aaKnown RBP17.02■□□□□ 0.31
SREBF1-213ENST00000485080 A0A096LPK6 155 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 H7BY64 318 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 NRP2O60462 931 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 IPO13O94829 963 aaKnown RBP17.01■□□□□ 0.31
SREBF1-213ENST00000485080 RAB40ALP0C0E4 278 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 GCAP28676 217 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 TYK2P29597 1187 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 CSNK1G2P78368 415 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 PRTGQ2VWP7 1150 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 FAM214AQ32MH5 1076 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 PTCHD3Q3KNS1 767 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 TAF1BQ53T94 588 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-213ENST00000485080 LGSNQ5TDP6 509 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 SULT1C3Q6IMI6 304 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 FRMPD2BQ6IN97 320 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 WDR93Q6P2C0 686 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 TIFABQ6ZNK6 161 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 ZNF655Q8N720 491 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-213ENST00000485080 ZSCAN1Q8NBB4 408 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 CT55Q8WUE5 264 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 MTBPQ96DY7 904 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 CLIP3Q96DZ5 547 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 PRAP1Q96NZ9 151 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 GPR78Q96P69 363 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 NDC1Q9BTX1 674 aa17.01■□□□□ 0.31
SREBF1-213ENST00000485080 AKIRIN1Q9H9L7 192 aaPredicted RBP17.01■□□□□ 0.31
SREBF1-213ENST00000485080 PIEZO2Q9H5I5 2752 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 LOC105369274A0A096LPK9 316 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 LOC102723532A0A0G2JNH3 316 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 A0A0J9YVX5 310 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 POC1B-GALNT4F8VUJ3 575 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 H0YGG7 62 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 TXNDC9O14530 226 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 KERAO60938 352 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 KRT37O76014 449 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 KLHL2O95198 593 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 CAPN1P07384 714 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 SNRPAP09012 282 aaKnown RBP17■□□□□ 0.31
SREBF1-213ENST00000485080 COL6A2P12110 1019 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 TFEBP19484 476 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 TCN2P20062 427 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 F8A1P23610 371 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 DLSTP36957 453 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 KCNC1P48547 511 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 VSX2P58304 361 aaPredicted RBP17■□□□□ 0.31
SREBF1-213ENST00000485080 ARF3P61204 181 aaPredicted RBP17■□□□□ 0.31
SREBF1-213ENST00000485080 RPS15AP62244 130 aaKnown RBP17■□□□□ 0.31
SREBF1-213ENST00000485080 CXADRP78310 365 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 MC1RQ01726 317 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 DNASE1L3Q13609 305 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 ACAP2Q15057 778 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 WASHC2DQ5SRD0 308 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 GSPT2Q8IYD1 628 aaKnown RBP17■□□□□ 0.31
SREBF1-213ENST00000485080 OR4N4Q8N0Y3 316 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 UHMK1Q8TAS1 419 aaKnown RBP17■□□□□ 0.31
SREBF1-213ENST00000485080 MR1Q95460 341 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 PYCR2Q96C36 320 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 NXNL1Q96CM4 212 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 CRELD1Q96HD1 420 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 ATOH8Q96SQ7 321 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 EGFL8Q99944 293 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 CHST8Q9H2A9 424 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 CNOT10Q9H9A5 744 aaKnown RBP17■□□□□ 0.31
SREBF1-213ENST00000485080 PPCSQ9HAB8 311 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 IL17BQ9UHF5 180 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 PTBP2Q9UKA9 531 aaKnown RBP17■□□□□ 0.31
SREBF1-213ENST00000485080 LHX6Q9UPM6 363 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 SH2B3Q9UQQ2 575 aa17■□□□□ 0.31
SREBF1-213ENST00000485080 ZNF891A8MT65 544 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-213ENST00000485080 HAT1O14929 419 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 AGXTP21549 392 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 CCR8P51685 355 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 ARHGAP40Q5TG30 622 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 GARNL3Q5VVW2 1013 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 THOC6Q86W42 341 aaKnown RBP16.99■□□□□ 0.31
SREBF1-213ENST00000485080 ARHGEF39Q8N4T4 335 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 TTC29Q8NA56 475 aaPredicted RBP16.99■□□□□ 0.31
SREBF1-213ENST00000485080 SLC5A11Q8WWX8 675 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 CCDC77Q9BR77 488 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 NLNQ9BYT8 704 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 UNKQ9C0B0 810 aaKnown RBP16.99■□□□□ 0.31
SREBF1-213ENST00000485080 SLC7A5P2Q9GIP4 190 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 ALG9Q9H6U8 611 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 NUDT4Q9NZJ9 180 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 RNF112Q9ULX5 631 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 KCNE2Q9Y6J6 123 aa16.99■□□□□ 0.31
SREBF1-213ENST00000485080 TLN1Q9Y490 2541 aaKnown RBP16.99■□□□□ 0.31
SREBF1-213ENST00000485080 ATRXP46100 2492 aa16.98■□□□□ 0.31
SREBF1-213ENST00000485080 SPTA1P02549 2419 aa16.98■□□□□ 0.31
SREBF1-213ENST00000485080 A0A1B0GX78 115 aa16.98■□□□□ 0.31
SREBF1-213ENST00000485080 HYKKA2RU49 373 aa16.98■□□□□ 0.31
SREBF1-213ENST00000485080 SYCE1LA8MT33 242 aa16.98■□□□□ 0.31
SREBF1-213ENST00000485080 TRIM49D1C9J1S8 452 aa16.98■□□□□ 0.31
SREBF1-213ENST00000485080 DSCR3O14972 297 aa16.98■□□□□ 0.31
SREBF1-213ENST00000485080 TAPBPO15533 448 aa16.98■□□□□ 0.31
SREBF1-213ENST00000485080 CD63P08962 238 aa16.98■□□□□ 0.31
SREBF1-213ENST00000485080 CDH1P12830 882 aa16.98■□□□□ 0.31
SREBF1-213ENST00000485080 PTPN4P29074 926 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms