RNA–Protein interactions for RNA: ENST00000484309.5

MSH5-216, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 857 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-216ENST00000484309 EIF3HO15372 352 aaKnown RBP eCLIP11.72□□□□□ -0.53
MSH5-216ENST00000484309 SLC16A5O15375 505 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 GPR42O15529 346 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 UMODP07911 640 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 HIST1H2AGP0C0S8 130 aaPredicted RBP11.72□□□□□ -0.53
MSH5-216ENST00000484309 ZNF37AP17032 561 aaPredicted RBP11.72□□□□□ -0.53
MSH5-216ENST00000484309 HIST1H2ADP20671 130 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 GPX6P59796 221 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 ABATP80404 500 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 RAPSNQ13702 412 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 ZXDCQ2QGD7 858 aaPredicted RBP11.72□□□□□ -0.53
MSH5-216ENST00000484309 FAM214AQ32MH5 1076 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 YOD1Q5VVQ6 348 aaPredicted RBP11.72□□□□□ -0.53
MSH5-216ENST00000484309 ZNF572Q7Z3I7 529 aaPredicted RBP11.72□□□□□ -0.53
MSH5-216ENST00000484309 MRGPREQ86SM8 312 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 SLC26A11Q86WA9 606 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 APLFQ8IW19 511 aaPredicted RBP11.72□□□□□ -0.53
MSH5-216ENST00000484309 CEP97Q8IW35 865 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 PRSS58Q8IYP2 241 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 CSNK1A1LQ8N752 337 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 OR2Y1Q8NGV0 311 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 COL26A1Q96A83 441 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 PYCR2Q96C36 320 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 VPS39Q96JC1 886 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 HIST1H2AHQ96KK5 128 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 HIST1H2AJQ99878 128 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 H2AFJQ9BTM1 129 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 LRRC1Q9BTT6 524 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 RHOJQ9H4E5 214 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 SOX17Q9H6I2 414 aaPredicted RBP11.72□□□□□ -0.53
MSH5-216ENST00000484309 CAB39LQ9H9S4 337 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 ARL15Q9NXU5 204 aa11.72□□□□□ -0.53
MSH5-216ENST00000484309 RUVBL1Q9Y265 456 aaKnown RBP11.72□□□□□ -0.53
MSH5-216ENST00000484309 MTO1Q9Y2Z2 717 aaKnown RBP11.72□□□□□ -0.53
MSH5-216ENST00000484309 NBASA2RRP1 2371 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 TCRBV9S1A1TA0A576 114 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 FEZF1A0PJY2 475 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 J3QKU1 62 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 SUV39H1O43463 412 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 ALOX12BO75342 701 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 ZIC2O95409 532 aaPredicted RBP11.71□□□□□ -0.53
MSH5-216ENST00000484309 CDH1P12830 882 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 EZRP15311 586 aaKnown RBP11.71□□□□□ -0.53
MSH5-216ENST00000484309 SNRPNP63162 240 aaKnown RBP11.71□□□□□ -0.53
MSH5-216ENST00000484309 SSPNQ14714 243 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 NKG7Q16617 165 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 MUM1Q2TAK8 710 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 PRTGQ2VWP7 1150 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 SBSNQ6UWP8 590 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 ASB18Q6ZVZ8 466 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 OVCH1Q7RTY7 1134 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 PPP1R32Q7Z5V6 425 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 C17orf64Q86WR6 236 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 CTAGE3PQ8IX95 158 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 ANKRD49Q8WVL7 239 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 RERGQ96A58 199 aaPredicted RBP11.71□□□□□ -0.53
MSH5-216ENST00000484309 FKBP10Q96AY3 582 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 OR2A5Q96R48 311 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 SPSB2Q99619 263 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 MACROD1Q9BQ69 325 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 SLC25A23Q9BV35 468 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 ZNF304Q9HCX3 659 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 NSMCE4AQ9NXX6 385 aa11.71□□□□□ -0.53
MSH5-216ENST00000484309 MRPS2Q9Y399 296 aaKnown RBP11.71□□□□□ -0.53
MSH5-216ENST00000484309 TENM4Q6N022 2769 aa11.71□□□□□ -0.54
MSH5-216ENST00000484309 PHGDHO43175 533 aaKnown RBP11.7□□□□□ -0.54
MSH5-216ENST00000484309 FAM155BO75949 473 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 PIM1P11309 404 aaPredicted RBP11.7□□□□□ -0.54
MSH5-216ENST00000484309 FBLP22087 321 aaKnown RBP11.7□□□□□ -0.54
MSH5-216ENST00000484309 GMPRP36959 345 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 MAGEA4P43358 317 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 SLC12A2P55011 1212 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 CSNK1G2P78368 415 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 MEF2AQ02078 507 aaPredicted RBP11.7□□□□□ -0.54
MSH5-216ENST00000484309 CAV1Q03135 178 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 CBLBQ13191 982 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 EFTUD2Q15029 972 aaKnown RBP eCLIP11.7□□□□□ -0.541e-10■■■■■ 56.3
MSH5-216ENST00000484309 CAPN13Q6MZZ7 669 aaPredicted RBP11.7□□□□□ -0.54
MSH5-216ENST00000484309 TCTN3Q6NUS6 607 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 LCTLQ6UWM7 567 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 ATG14Q6ZNE5 492 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 C3orf62Q6ZUJ4 267 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 SPATA6LQ8N4H0 392 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 CDKL2Q92772 493 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 PTERQ96BW5 349 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 MESP1Q9BRJ9 268 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 MCMBPQ9BTE3 642 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 YIPF2Q9BWQ6 316 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 SGPP1Q9BX95 441 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 TRIM54Q9BYV2 358 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 EPN3Q9H201 632 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 GPAMQ9HCL2 828 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 TMEM184CQ9NVA4 438 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 P4HTMQ9NXG6 502 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 TXNDC16Q9P2K2 825 aa11.7□□□□□ -0.54
MSH5-216ENST00000484309 A0A0A6YYC8 382 aaPredicted RBP11.69□□□□□ -0.54
MSH5-216ENST00000484309 FAM159BA6NKW6 160 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 I3L1I5 382 aaPredicted RBP11.69□□□□□ -0.54
MSH5-216ENST00000484309 PEX12O00623 359 aa11.69□□□□□ -0.54
MSH5-216ENST00000484309 C1QAP02745 245 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms