RNA–Protein interactions for RNA: ENST00000484088.5

ITGB1-213, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-213ENST00000484088 NONOQ15233 471 aaKnown RBP eCLIP2.02□□□□□ -2.091e-8■■■□□ 16.8
ITGB1-213ENST00000484088 NHSL2Q5HYW2 709 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 SLC35D3Q5M8T2 416 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 SFMBT2Q5VUG0 894 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 LYSMD4Q5XG99 296 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 KLHL10Q6JEL2 608 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 PODNL1Q6PEZ8 512 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 SHQ1Q6PI26 577 aaKnown RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 ENPP7Q6UWV6 458 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 CEACAM20Q6UY09 585 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 LEKR1Q6ZMV7 388 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 GBP6Q6ZN66 633 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 CCDC73Q6ZRK6 1079 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 C11orf57Q6ZUT1 292 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 BTN2A1Q7KYR7 527 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 C5orf24Q7Z6I8 188 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 LGI2Q8N0V4 545 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 SIX6OS1Q8N1H7 587 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 LRTM2Q8N967 370 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 NHLRC2Q8NBF2 726 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 ATAD1Q8NBU5 361 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 APOBEC4Q8WW27 367 aaKnown RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 PIK3R3Q92569 461 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 DYRK2Q92630 601 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 EXOC4Q96A65 974 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 SNRNP40Q96DI7 357 aaKnown RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 THOC1Q96FV9 657 aaKnown RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 RBM41Q96IZ5 413 aaKnown RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 FAM210AQ96ND0 272 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 GBP5Q96PP8 586 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 KLHL5Q96PQ7 755 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 F2RL3Q96RI0 385 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 MYCBPQ99417 103 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 PARK7Q99497 189 aaKnown RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 SUDS3Q9H7L9 328 aaPredicted RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 YY1AP1Q9H869 796 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 MINDY3Q9H8M7 445 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 ZWILCHQ9H900 591 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 MRPL17Q9NRX2 175 aaKnown RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 PNPLA3Q9NST1 481 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 ERAP1Q9NZ08 941 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 OR6C2Q9NZP2 312 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 TXNDC16Q9P2K2 825 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 NOL7Q9UMY1 257 aaKnown RBP2.02□□□□□ -2.09
ITGB1-213ENST00000484088 KCNJ14Q9UNX9 436 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 GAB2Q9UQC2 676 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 LIPT1Q9Y234 373 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 ARID2Q68CP9 1835 aa2.02□□□□□ -2.09
ITGB1-213ENST00000484088 A0A0U1RQK1 487 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 ARHGEF37A1IGU5 675 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 ZNF320A2RRD8 509 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 PRR23AA6NEV1 266 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 GLTPD2A6NH11 291 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 SRRM4A7MD48 611 aaKnown RBP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 WDR46O15213 610 aaKnown RBP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 SNX3O60493 162 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 FMO6PO60774 539 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 CDK2AP2O75956 126 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 KRT33AO76009 404 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 AP2A2O94973 939 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 SLC16A8O95907 504 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 ATP1B1P05026 303 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 CSTF2P33240 577 aaKnown RBP eCLIP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 HSD17B3P37058 310 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 CDKN1AP38936 164 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 MAGEA11P43364 429 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 TNNT3P45378 269 aaPredicted RBP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 LEPRP48357 1165 aaKnown RBP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 NR0B1P51843 470 aaKnown RBP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 PHEXP78562 749 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 HMGN5P82970 282 aaKnown RBP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 SCN1BQ07699 218 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 KLC1Q07866 573 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 ILF2Q12905 390 aaKnown RBP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 PHKG1Q16816 387 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 TWISTNBQ3B726 338 aaPredicted RBP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 KRTAP27-1Q3LI81 207 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 CCDC92Q53HC0 331 aaPredicted RBP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 C20orf194Q5TEA3 1177 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 OR4C11Q6IEV9 310 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 PLBD1Q6P4A8 553 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 ZNF790Q6PG37 636 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 PSRC1Q6PGN9 363 aaPredicted RBP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 PET117Q6UWS5 81 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 TMEM207Q6UWW9 146 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 Q6ZRP5 223 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 LINC00696Q6ZRV3 163 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 GPR141Q7Z602 305 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 TDHQ8IZJ6 230 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 NDUFAF2Q8N183 169 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 MARVELD2Q8N4S9 558 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 NCOA7Q8NI08 942 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 GDAP1Q8TB36 358 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 GATAD1Q8WUU5 269 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 NR4A3Q92570 626 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 TAF15Q92804 592 aaKnown RBP eCLIP2.01□□□□□ -2.09
ITGB1-213ENST00000484088 AZIN2Q96A70 460 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 PYCR2Q96C36 320 aa2.01□□□□□ -2.09
ITGB1-213ENST00000484088 LGALS12Q96DT0 336 aa2.01□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms