RNA–Protein interactions for RNA: ENST00000483922.1

UBR4-213, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 543 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-213ENST00000483922 FERMT1Q9BQL6 677 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 PLCD4Q9BRC7 762 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 TRIM51Q9BSJ1 452 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 MKKSQ9NPJ1 570 aaPredicted RBP12.19□□□□□ -0.46
UBR4-213ENST00000483922 KLHL1Q9NR64 748 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 NPIPA1Q9UND3 350 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 ASB1Q9Y576 335 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 FAM169AQ9Y6X4 670 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 CACNA1CQ13936 2221 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 SPG11Q96JI7 2443 aa12.19□□□□□ -0.46
UBR4-213ENST00000483922 FAM227AF5H4B4 570 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 MATN4O95460 622 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 STATHP02808 62 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 APOA4P06727 396 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 RBPJQ06330 500 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 KLF1Q13351 362 aaPredicted RBP12.18□□□□□ -0.46
UBR4-213ENST00000483922 GBX1Q14549 363 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 CTSL3PQ5NE16 218 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 ACER2Q5QJU3 275 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 ZNF468Q5VIY5 522 aaPredicted RBP12.18□□□□□ -0.46
UBR4-213ENST00000483922 ZNF425Q6IV72 752 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 AFTPHQ6ULP2 937 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 ZNF227Q86WZ6 799 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 CRLF3Q8IUI8 442 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 PLD3Q8IV08 490 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 CSNK1A1LQ8N752 337 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 TC2NQ8N9U0 490 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 OR6P1Q8NGX9 317 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 AGAP11Q8TF27 550 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 MVB12AQ96EY5 273 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 FRMD6Q96NE9 622 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 ALS2CR12Q96Q35 445 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 TUBB6Q9BUF5 446 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 VN1R1Q9GZP7 353 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 ETNK1Q9HBU6 452 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 RIMKLBQ9ULI2 386 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 CDC14AQ9UNH5 594 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 PCDHGB6Q9Y5F9 930 aa12.18□□□□□ -0.46
UBR4-213ENST00000483922 PRMT5O14744 637 aaPredicted RBP12.17□□□□□ -0.46
UBR4-213ENST00000483922 ASNA1O43681 348 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 NEURL1O76050 574 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 SUN1O94901 812 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 TJP3O95049 919 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 ICAM2P13598 275 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 IGFBP2P18065 325 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 ADRA1DP25100 572 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 RWDD2BP57060 319 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 CDH17Q12864 832 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 FASTKD1Q53R41 847 aaKnown RBP12.17□□□□□ -0.46
UBR4-213ENST00000483922 KRTCAP3Q53RY4 240 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 PLAG1Q6DJT9 500 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 MEX3BQ6ZN04 569 aaKnown RBP12.17□□□□□ -0.46
UBR4-213ENST00000483922 CPEB2Q7Z5Q1 589 aaKnown RBP12.17□□□□□ -0.46
UBR4-213ENST00000483922 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.17□□□□□ -0.46
UBR4-213ENST00000483922 MARVELD2Q8N4S9 558 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 OR9A4Q8NGU2 314 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 SUN3Q8TAQ9 357 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 CCDC138Q96M89 665 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 BIRC8Q96P09 236 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 MACROD1Q9BQ69 325 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 RAB11FIP5Q9BXF6 653 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 CHRAC1Q9NRG0 131 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 C14orf105Q9NVL8 296 aa12.17□□□□□ -0.46
UBR4-213ENST00000483922 TSR3Q9UJK0 312 aaKnown RBP12.17□□□□□ -0.46
UBR4-213ENST00000483922 ARHGEF33A8MVX0 844 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 AKR1B15C9JRZ8 316 aaPredicted RBP12.16□□□□□ -0.46
UBR4-213ENST00000483922 PSMD3O43242 534 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 C8orf89P0DMQ9 161 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 ETS1P14921 441 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 CMPK1P30085 196 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 NR0B1P51843 470 aaKnown RBP12.16□□□□□ -0.46
UBR4-213ENST00000483922 ALDH6A1Q02252 535 aaKnown RBP12.16□□□□□ -0.46
UBR4-213ENST00000483922 OR1C1Q15619 314 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 GALNTL5Q7Z4T8 443 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 ANKRD37Q7Z713 158 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 LRRC56Q8IYG6 542 aaPredicted RBP12.16□□□□□ -0.46
UBR4-213ENST00000483922 LRRC57Q8N9N7 239 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 DNAAF3Q8N9W5 541 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 PPFIBP2Q8ND30 876 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 NRGNQ92686 78 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 ZNF354BQ96LW1 612 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 TMUB1Q9BVT8 246 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 GPAMQ9HCL2 828 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 MRPS30Q9NP92 439 aaKnown RBP12.16□□□□□ -0.46
UBR4-213ENST00000483922 NPDC1Q9NQX5 325 aaPredicted RBP12.16□□□□□ -0.46
UBR4-213ENST00000483922 REXO2Q9Y3B8 237 aaKnown RBP12.16□□□□□ -0.46
UBR4-213ENST00000483922 TCAF1Q9Y4C2 921 aa12.16□□□□□ -0.46
UBR4-213ENST00000483922 SCN2AQ99250 2005 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 SOWAHDA6NJG2 315 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 CD3EAPO15446 510 aaKnown RBP12.15□□□□□ -0.46
UBR4-213ENST00000483922 TTI1O43156 1089 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 DNAJB6O75190 326 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 ERVK-10P10266 1014 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 CASP6P55212 293 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 PRDX1Q06830 199 aaKnown RBP12.15□□□□□ -0.46
UBR4-213ENST00000483922 TFF3Q07654 80 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 BTBD16Q32M84 506 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 P3H1Q32P28 736 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 GARNL3Q5VVW2 1013 aa12.15□□□□□ -0.46
UBR4-213ENST00000483922 PTRHD1Q6GMV3 140 aaKnown RBP12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms