RNA–Protein interactions for RNA: ENST00000483495.5

CPNE1-225, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,853 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-225ENST00000483495 SCARF2Q96GP6 870 aaPredicted RBP12.77□□□□□ -0.37
CPNE1-225ENST00000483495 IL17FQ96PD4 163 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 EBPLQ9BY08 206 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 RPF2Q9H7B2 306 aaKnown RBP12.77□□□□□ -0.37
CPNE1-225ENST00000483495 SPATA7Q9P0W8 599 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 USP22Q9UPT9 525 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 MAPRE3Q9UPY8 281 aa12.77□□□□□ -0.37
CPNE1-225ENST00000483495 HOXC4P09017 264 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 SLC35G4P0C7Q5 338 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 NCK1P16333 377 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 ZNF26P17031 533 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 GGT1P19440 569 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 IL10P22301 178 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 PIK3CBP42338 1070 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 KIR3DL1P43629 444 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 RPS13P62277 151 aaKnown RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 PLIN5Q00G26 463 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 UGT8Q16880 541 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 GPR180Q86V85 440 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 FAM129CQ86XR2 697 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 LMNTD1Q8N9Z9 388 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TRPV3Q8NET8 790 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 OR8J2Q8NGG1 315 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 SIPA1Q96FS4 1042 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 CPPED1Q9BRF8 314 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 APOOQ9BUR5 198 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 BTBD1Q9H0C5 482 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TRIT1Q9H3H1 467 aaKnown RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 IKZF5Q9H5V7 419 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 DMRT3Q9NQL9 472 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 NIPSNAP3AQ9UFN0 247 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 PCDHB14Q9Y5E9 798 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TBC1D3DA0A087WVF3 549 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TBC1D3IA0A087WXS9 549 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TBC1D3EA0A087X179 549 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TBC1D3KA0A087X1G2 549 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TBC1D3FA6NER0 549 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 PRR23AA6NEV1 266 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 C2CD4DB7Z1M9 353 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TBC1D3LB9A6J9 549 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 SCN2BO60939 215 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TIPRLO75663 272 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 LRATO95237 230 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TBC1D3HP0C7X1 549 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 OXTRP30559 389 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 ASMTP46597 345 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TRPC1P48995 793 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 CLCNKAP51800 687 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 WNT3P56703 355 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 MRPS35P82673 323 aaKnown RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 CTBSQ01459 385 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TSTA3Q13630 321 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 CYP51A1Q16850 503 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 PGS1Q32NB8 556 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 PYCR3Q53H96 274 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 MTX3Q5HYI7 312 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TBCELQ5QJ74 424 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TBC1D3GQ6DHY5 549 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 GLYATQ6IB77 296 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TBC1D3CQ6IPX1 549 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 CHST15Q7LFX5 561 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 CAMKMTQ7Z624 323 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TBC1D3Q8IZP1 549 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 SLC44A3Q8N4M1 653 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 DTWD1Q8N5C7 304 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 C1orf52Q8N6N3 182 aaKnown RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 ZNF548Q8NEK5 533 aaPredicted RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 TNIP2Q8NFZ5 429 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 PCBD2Q9H0N5 130 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 KAT8Q9H7Z6 458 aaKnown RBP12.76□□□□□ -0.37
CPNE1-225ENST00000483495 GORASP2Q9H8Y8 452 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 AGPAT4Q9NRZ5 378 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 SLC6A13Q9NSD5 602 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 RAB26Q9ULW5 256 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 PLAGL1Q9UM63 463 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 SZT2Q5T011 3432 aa12.76□□□□□ -0.37
CPNE1-225ENST00000483495 XIRP2A4UGR9 3374 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 DENRO43583 198 aaKnown RBP12.75□□□□□ -0.37
CPNE1-225ENST00000483495 ACP5P13686 325 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 TIA1P31483 386 aaKnown RBP eCLIP12.75□□□□□ -0.373e-7■■■■■ 41.5
CPNE1-225ENST00000483495 HSPA13P48723 471 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 GZMMP51124 257 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 PPP2CBP62714 309 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 PPP2CAP67775 309 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 GTDC1Q4AE62 458 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 THEMIS2Q5TEJ8 643 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 CALHM3Q86XJ0 350 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 TMEM132CQ8N3T6 1108 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 OR2T12Q8NG77 320 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 OR52E4Q8NGH9 312 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 FAM110BQ8TC76 370 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 EME1Q96AY2 570 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 BIRC7Q96CA5 298 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 MRGPRX1Q96LB2 322 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 NSMCE2Q96MF7 247 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 INPP5KQ9BT40 448 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 THUMPD3Q9BV44 507 aaKnown RBP12.75□□□□□ -0.37
CPNE1-225ENST00000483495 REXO4Q9GZR2 422 aaKnown RBP12.75□□□□□ -0.37
CPNE1-225ENST00000483495 SPNS1Q9H2V7 528 aa12.75□□□□□ -0.37
CPNE1-225ENST00000483495 VCXQ9H320 206 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms