RNA–Protein interactions for RNA: ENST00000483275.1

VARS-226, Transcript of valyl-tRNA synthetase, humanhuman

TSL 3

Gene VARS, Length 450 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-226ENST00000483275 ZC3H7AQ8IWR0 971 aaKnown RBP13.21□□□□□ -0.29
VARS-226ENST00000483275 SLC34A3Q8N130 599 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 RAB42Q8N4Z0 105 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 HMGCLL1Q8TB92 370 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 LPGAT1Q92604 370 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 MFSD3Q96ES6 412 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 CCDC120Q96HB5 630 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 VPS50Q96JG6 964 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 PHF12Q96QT6 1004 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 SLC30A3Q99726 388 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 PLCD4Q9BRC7 762 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 MRPS30Q9NP92 439 aaKnown RBP13.21□□□□□ -0.29
VARS-226ENST00000483275 ENAMQ9NRM1 1142 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 SPATA7Q9P0W8 599 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 PCYOX1Q9UHG3 505 aa13.21□□□□□ -0.29
VARS-226ENST00000483275 SETD2Q9BYW2 2564 aaPredicted RBP13.2□□□□□ -0.3
VARS-226ENST00000483275 TRAV17A0A0B4J275 112 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 A0A1B0GUH1 482 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 HAT1O14929 419 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 FOXS1O43638 330 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 SEC24DO94855 1032 aaPredicted RBP13.2□□□□□ -0.3
VARS-226ENST00000483275 RPS3P23396 243 aaKnown RBP eCLIP13.2□□□□□ -0.37e-10■■■■■ 28.8
VARS-226ENST00000483275 CXCR2P25025 360 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 STIP1P31948 543 aaKnown RBP13.2□□□□□ -0.3
VARS-226ENST00000483275 CCNFP41002 786 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 CUL1Q13616 776 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 RPUSD3Q6P087 351 aaKnown RBP13.2□□□□□ -0.3
VARS-226ENST00000483275 LRRC8BQ6P9F7 803 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 PRSS41Q7RTY9 318 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 ADCK2Q7Z695 626 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 OR9A1PQ8NGU1 263 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 FOPNLQ96NB1 174 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 PKP4Q99569 1192 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 MACROD1Q9BQ69 325 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 TSPAN10Q9H1Z9 355 aaPredicted RBP13.2□□□□□ -0.3
VARS-226ENST00000483275 PAK5Q9P286 719 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 MKL2Q9ULH7 1088 aa13.2□□□□□ -0.3
VARS-226ENST00000483275 NCOA6Q14686 2063 aaPredicted RBP13.19□□□□□ -0.3
VARS-226ENST00000483275 TCRBV7S3A2A0A539 114 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 CCL21O00585 134 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 ZNHIT1O43257 154 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 VPS26AO75436 327 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 WFS1O76024 890 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 FKBP9O95302 570 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 MATN4O95460 622 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 ANXA5P08758 320 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 ERGP11308 486 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 ELAVL4P26378 380 aaKnown RBP13.19□□□□□ -0.3
VARS-226ENST00000483275 ZNF33BQ06732 778 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 GBX1Q14549 363 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 SIX1Q15475 284 aaPredicted RBP13.19□□□□□ -0.3
VARS-226ENST00000483275 KLHL38Q2WGJ6 581 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 MFSD4BQ5TF39 518 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 ICE2Q659A1 982 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 LRRC6Q86X45 466 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 MPP5Q8N3R9 675 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 ARHGEF39Q8N4T4 335 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 GIMAP7Q8NHV1 300 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 SMPDL3AQ92484 453 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 PEX13Q92968 403 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 RELTQ969Z4 430 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 HES7Q9BYE0 225 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 RBCK1Q9BYM8 510 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 C14orf105Q9NVL8 296 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 RIC8BQ9NVN3 520 aa13.19□□□□□ -0.3
VARS-226ENST00000483275 A8MUI8 341 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 MYO1CO00159 1063 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 KPNA5O15131 536 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 AVILO75366 819 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 BMP10O95393 424 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 SLC16A8O95907 504 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 SYF2O95926 243 aaKnown RBP13.18□□□□□ -0.3
VARS-226ENST00000483275 CHRM3P20309 590 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 CDC25BP30305 580 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 SLC26A3P40879 764 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 KCNJ1P48048 391 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 VPS41P49754 854 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 PNLIPRP1P54315 467 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 TRIP13Q15645 432 aaPredicted RBP13.18□□□□□ -0.3
VARS-226ENST00000483275 TYSND1Q2T9J0 566 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 ANKRD20A4Q4UJ75 823 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 ZNF425Q6IV72 752 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 TMEM207Q6UWW9 146 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 NCCRP1Q6ZVX7 275 aaPredicted RBP13.18□□□□□ -0.3
VARS-226ENST00000483275 SPC24Q8NBT2 197 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 OR9A4Q8NGU2 314 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 OR2A5Q96R48 311 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 VN1R1Q9GZP7 353 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 IL22Q9GZX6 179 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 DRC3Q9H069 523 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 ZNF700Q9H0M5 742 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 EIF2B3Q9NR50 452 aaKnown RBP13.18□□□□□ -0.3
VARS-226ENST00000483275 ANKRD10Q9NXR5 420 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 HCN3Q9P1Z3 774 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 SEC14L3Q9UDX4 400 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 GUCA1BQ9UMX6 200 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 SH2B3Q9UQQ2 575 aa13.18□□□□□ -0.3
VARS-226ENST00000483275 A0A1W2PQ72 361 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 OR5H15A6NDH6 313 aa13.17□□□□□ -0.3
VARS-226ENST00000483275 SMAPO00193 183 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms