RNA–Protein interactions for RNA: ENST00000482647.5

SEC13-217, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 782 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-217ENST00000482647 CENPLQ8N0S6 344 aaPredicted RBP20.02■□□□□ 0.8
SEC13-217ENST00000482647 TTC29Q8NA56 475 aaPredicted RBP20.02■□□□□ 0.8
SEC13-217ENST00000482647 MR1Q95460 341 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 RERGQ96A58 199 aaPredicted RBP20.02■□□□□ 0.8
SEC13-217ENST00000482647 OR4K3Q96R72 315 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 CNOT10Q9H9A5 744 aaKnown RBP20.02■□□□□ 0.8
SEC13-217ENST00000482647 CROTQ9UKG9 612 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 SLC22A14Q9Y267 594 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 DYRK1BQ9Y463 629 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 ITPR1Q14643 2758 aa20.02■□□□□ 0.8
SEC13-217ENST00000482647 LOC105369274A0A096LPK9 316 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 LOC102723532A0A0G2JNH3 316 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 SYCE1LA8MT33 242 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 C21orf140B9A014 251 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 H0YGG7 62 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 KERAO60938 352 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 EIF2S1P05198 315 aaKnown RBP20.01■□□□□ 0.79
SEC13-217ENST00000482647 TCN2P20062 427 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 AGXTP21549 392 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 GCAP28676 217 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 GRK3P35626 688 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 GGT5P36269 586 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 KCNC1P48547 511 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 CCR8P51685 355 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 ARF3P61204 181 aaPredicted RBP20.01■□□□□ 0.79
SEC13-217ENST00000482647 ERCC6LQ2NKX8 1250 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 FAM214AQ32MH5 1076 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 OR4N4Q8N0Y3 316 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 PDPRQ8NCN5 879 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 ABHD11Q8NFV4 315 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 RHEBL1Q8TAI7 183 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 PROKR1Q8TCW9 393 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 SLC5A11Q8WWX8 675 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 OR2A5Q96R48 311 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 PRORYQ9H606 182 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 STARD5Q9NSY2 213 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 TXLNGQ9NUQ3 528 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 WWOXQ9NZC7 414 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 KCND3Q9UK17 655 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 SH2B3Q9UQQ2 575 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 KCNE2Q9Y6J6 123 aa20.01■□□□□ 0.79
SEC13-217ENST00000482647 IQANK1A0A1B0GTG1 560 aa20■□□□□ 0.79
SEC13-217ENST00000482647 FITM1A5D6W6 292 aa20■□□□□ 0.79
SEC13-217ENST00000482647 K7ENP7 123 aa20■□□□□ 0.79
SEC13-217ENST00000482647 HAT1O14929 419 aa20■□□□□ 0.79
SEC13-217ENST00000482647 IPO13O94829 963 aaKnown RBP20■□□□□ 0.79
SEC13-217ENST00000482647 COL6A2P12110 1019 aa20■□□□□ 0.79
SEC13-217ENST00000482647 CDH1P12830 882 aa20■□□□□ 0.79
SEC13-217ENST00000482647 SLC6A12P48065 614 aa20■□□□□ 0.79
SEC13-217ENST00000482647 RPS15AP62244 130 aaKnown RBP20■□□□□ 0.79
SEC13-217ENST00000482647 CSNK1G2P78368 415 aa20■□□□□ 0.79
SEC13-217ENST00000482647 ARHGAP40Q5TG30 622 aa20■□□□□ 0.79
SEC13-217ENST00000482647 EMBQ6PCB8 327 aa20■□□□□ 0.79
SEC13-217ENST00000482647 FAM199XQ6PEV8 388 aaPredicted RBP20■□□□□ 0.79
SEC13-217ENST00000482647 INO80CQ6PI98 192 aaPredicted RBP20■□□□□ 0.79
SEC13-217ENST00000482647 ZNF517Q6ZMY9 492 aaPredicted RBP20■□□□□ 0.79
SEC13-217ENST00000482647 KLHDC8AQ8IYD2 350 aa20■□□□□ 0.79
SEC13-217ENST00000482647 CT55Q8WUE5 264 aa20■□□□□ 0.79
SEC13-217ENST00000482647 SNRNP27Q8WVK2 155 aaKnown RBP20■□□□□ 0.79
SEC13-217ENST00000482647 EXT2Q93063 718 aa20■□□□□ 0.79
SEC13-217ENST00000482647 THAP11Q96EK4 314 aa20■□□□□ 0.79
SEC13-217ENST00000482647 GPR87Q9BY21 358 aa20■□□□□ 0.79
SEC13-217ENST00000482647 FAM117AQ9C073 453 aa20■□□□□ 0.79
SEC13-217ENST00000482647 CHST8Q9H2A9 424 aa20■□□□□ 0.79
SEC13-217ENST00000482647 AKIRIN1Q9H9L7 192 aaPredicted RBP20■□□□□ 0.79
SEC13-217ENST00000482647 PPCSQ9HAB8 311 aa20■□□□□ 0.79
SEC13-217ENST00000482647 NUDT4Q9NZJ9 180 aa20■□□□□ 0.79
SEC13-217ENST00000482647 PSMC3IPQ9P2W1 217 aaPredicted RBP20■□□□□ 0.79
SEC13-217ENST00000482647 CACNA1BQ00975 2339 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 KCNE1BA0A087WTH5 132 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 HYKKA2RU49 373 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 SUPT3HB4E1H0 165 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 TXNDC9O14530 226 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 SUPT3HO75486 399 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 WDR47O94967 919 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 ALAS2P22557 587 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 GDF5P43026 501 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 GLRBP48167 497 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 RPS15P62841 145 aaKnown RBP19.99■□□□□ 0.79
SEC13-217ENST00000482647 DNASE1L3Q13609 305 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 C18orf21Q32NC0 220 aaPredicted RBP19.99■□□□□ 0.79
SEC13-217ENST00000482647 C1orf189Q5VU69 101 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 TIFABQ6ZNK6 161 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 TTLL10Q6ZVT0 673 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 GPR155Q7Z3F1 870 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 PLD3Q8IV08 490 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 CSNK1A1LQ8N752 337 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 OR4K1Q8NGD4 311 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 NEIL2Q969S2 332 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 CRELD1Q96HD1 420 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 SLC45A3Q96JT2 553 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 CABS1Q96KC9 395 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 TSNARE1Q96NA8 513 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 GPR78Q96P69 363 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 ATOH8Q96SQ7 321 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 C17orf62Q9BQA9 187 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 CUTCQ9NTM9 273 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 IL17BQ9UHF5 180 aa19.99■□□□□ 0.79
SEC13-217ENST00000482647 PTBP2Q9UKA9 531 aaKnown RBP19.99■□□□□ 0.79
SEC13-217ENST00000482647 PCDHGA6Q9Y5G7 932 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms