RNA–Protein interactions for RNA: ENST00000482558.5

SNX13-208, Transcript of sorting nexin 13, humanhuman

TSL 2

Gene SNX13, Length 1,139 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-208ENST00000482558 CNOT11Q9UKZ1 510 aaKnown RBP7.53□□□□□ -1.2
SNX13-208ENST00000482558 TBX21Q9UL17 535 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 PCDHGB4Q9UN71 923 aa7.53□□□□□ -1.2
SNX13-208ENST00000482558 ANKRD36A6QL64 1941 aa7.52□□□□□ -1.2
SNX13-208ENST00000482558 COL4A6Q14031 1691 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 C15orf38-AP3S2A0A0A6YYH1 394 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 TRAV19A0A0A6YYK7 116 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 KANSL1LA0AUZ9 987 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 PRSS38A1L453 326 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 SUPT3HB4E1H0 165 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 NRP2O60462 931 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 CLASP2O75122 1294 aaKnown RBP7.52□□□□□ -1.21
SNX13-208ENST00000482558 SUPT3HO75486 399 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 PGLSO95336 258 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 ESRRBO95718 433 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 SLC4A1P02730 911 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 LRG1P02750 347 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 ANXA2P07355 339 aaKnown RBP7.52□□□□□ -1.21
SNX13-208ENST00000482558 RPS17P08708 135 aaKnown RBP7.52□□□□□ -1.21
SNX13-208ENST00000482558 CBSLP0DN79 551 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 CCL5P13501 91 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 HOXB6P17509 224 aaKnown RBP7.52□□□□□ -1.21
SNX13-208ENST00000482558 MSH3P20585 1137 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 ITGALP20701 1170 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 DGKAP23743 735 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 SERPINA4P29622 427 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 FMO4P31512 558 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 CBSP35520 551 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 NNMTP40261 264 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 PIK3CGP48736 1102 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 CCL23P55773 120 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 LGALS4P56470 323 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 PSME3P61289 254 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 SNRPD1P62314 119 aaKnown RBP7.52□□□□□ -1.21
SNX13-208ENST00000482558 ARF5P84085 180 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 BCL2L1Q07817 233 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 BNIP2Q12982 314 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 CCNIQ14094 377 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 SPIDRQ14159 915 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 TRIM25Q14258 630 aaKnown RBP7.52□□□□□ -1.21
SNX13-208ENST00000482558 DMC1Q14565 340 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 RPS6KA2Q15349 733 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 GEN1Q17RS7 908 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 TTLL9Q3SXZ7 439 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 UGT3A2Q3SY77 523 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 SETMARQ53H47 684 aaPredicted RBP7.52□□□□□ -1.21
SNX13-208ENST00000482558 KRTCAP3Q53RY4 240 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 ZRANB3Q5FWF4 1079 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 PAQR3Q6TCH7 311 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 IL27RAQ6UWB1 636 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 TMEM207Q6UWW9 146 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 SNX20Q7Z614 316 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 ARPINQ7Z6K5 226 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 DEFB128Q7Z7B8 93 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 GPSM1Q86YR5 675 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 HPS6Q86YV9 775 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 PHYKPLQ8IUZ5 450 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 FAM9CQ8IZT9 166 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 PQLC1Q8N2U9 271 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 SPATA6LQ8N4H0 392 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 LEMD2Q8NC56 503 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 ICA1LQ8NDH6 482 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 MDGA1Q8NFP4 955 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 OR52K2Q8NGK3 314 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 FIBINQ8TAL6 211 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 ZNF483Q8TF39 744 aaPredicted RBP7.52□□□□□ -1.21
SNX13-208ENST00000482558 PTERQ96BW5 349 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 FAM136AQ96C01 138 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 ULK4Q96C45 1275 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 RCN3Q96D15 328 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 CLPTM1LQ96KA5 538 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 BIRC8Q96P09 236 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 LYSMD1Q96S90 227 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 ZNF382Q96SR6 550 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 VN1R3Q9BXE9 311 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 CD244Q9BZW8 370 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 FAM192AQ9GZU8 254 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 CLPBQ9H078 707 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 PRDM13Q9H4Q3 707 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 SUDS3Q9H7L9 328 aaPredicted RBP7.52□□□□□ -1.21
SNX13-208ENST00000482558 MID1IP1Q9NPA3 183 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 ABCB8Q9NUT2 735 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 POLR3BQ9NW08 1133 aaPredicted RBP7.52□□□□□ -1.21
SNX13-208ENST00000482558 IL17CQ9P0M4 197 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 GULP1Q9UBP9 304 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 LHX3Q9UBR4 397 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 EBF1Q9UH73 591 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 CROTQ9UKG9 612 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 AP3M1Q9Y2T2 418 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 DHRS7Q9Y394 339 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 OR51B4Q9Y5P0 310 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 MYLKQ15746 1914 aa7.52□□□□□ -1.21
SNX13-208ENST00000482558 FAM234BA2RU67 622 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 NEMP2A6NFY4 417 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 OR51F1A6NGY5 319 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 CLCA1A8K7I4 914 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 MRASO14807 208 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 ANGPT2O15123 496 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 RAD51BO15315 384 aa7.51□□□□□ -1.21
SNX13-208ENST00000482558 TSPAN3O60637 253 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms