RNA–Protein interactions for RNA: ENST00000482158.1

SF3B1-210, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 772 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-210ENST00000482158 TYSND1Q2T9J0 566 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 FFAR4Q5NUL3 377 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 PRSS55Q6UWB4 352 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-210ENST00000482158 G2E3Q7L622 706 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 AMIGO1Q86WK6 493 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 DZIP1Q86YF9 867 aaKnown RBP5.04□□□□□ -1.6
SF3B1-210ENST00000482158 DCLK2Q8N568 766 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 PIK3R3Q92569 461 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 TSACCQ96A04 125 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-210ENST00000482158 LGALS12Q96DT0 336 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 PGM2Q96G03 612 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 BSCL2Q96G97 398 aaPredicted RBP5.04□□□□□ -1.6
SF3B1-210ENST00000482158 MTMR12Q9C0I1 747 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 SDCBP2Q9H190 292 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 TMEM181Q9P2C4 612 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 CDH7Q9ULB5 785 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 KLK4Q9Y5K2 254 aa5.04□□□□□ -1.6
SF3B1-210ENST00000482158 IGHV4-4A0A075B6R2 117 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 A0A087X002 238 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 SNURFLB1AK76 121 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 PRSS46E5RG02 174 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 CDC123O75794 336 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-210ENST00000482158 IGKV3-20P01619 116 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 RLN1P04808 185 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 NFE2L1Q14494 772 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 RBM39Q14498 530 aaKnown RBP5.03□□□□□ -1.6
SF3B1-210ENST00000482158 CTR9Q6PD62 1173 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 PSRC1Q6PGN9 363 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-210ENST00000482158 SLC25A47Q6Q0C1 308 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 PIWIL3Q7Z3Z3 882 aaKnown RBP5.03□□□□□ -1.6
SF3B1-210ENST00000482158 LRTM2Q8N967 370 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 ATAD1Q8NBU5 361 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 DBF4BQ8NFT6 615 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 FIBINQ8TAL6 211 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 GDAP1Q8TB36 358 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 APOBEC4Q8WW27 367 aaKnown RBP5.03□□□□□ -1.6
SF3B1-210ENST00000482158 PI4K2AQ9BTU6 479 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 COPS7BQ9H9Q2 264 aaPredicted RBP5.03□□□□□ -1.6
SF3B1-210ENST00000482158 RAVER2Q9HCJ3 691 aaKnown RBP5.03□□□□□ -1.6
SF3B1-210ENST00000482158 RAB9BQ9NP90 201 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 RNF186Q9NXI6 227 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 PKD2L2Q9NZM6 624 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 ITGA11Q9UKX5 1188 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 PYGO1Q9Y3Y4 419 aa5.03□□□□□ -1.6
SF3B1-210ENST00000482158 OOEPA6NGQ2 149 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 YDJCA8MPS7 323 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 HHLA1C9JL84 531 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 GRID2O43424 1007 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 RAF1P04049 648 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 ATP1B1P05026 303 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 HSP90AB1P08238 724 aaKnown RBP5.02□□□□□ -1.61
SF3B1-210ENST00000482158 NR0B1P51843 470 aaKnown RBP5.02□□□□□ -1.61
SF3B1-210ENST00000482158 KCNJ10P78508 379 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 SULT2A1Q06520 285 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 TEAD2Q15562 447 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 RBBP7Q16576 425 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 SPOUT1Q5T280 376 aaKnown RBP5.02□□□□□ -1.61
SF3B1-210ENST00000482158 LCN1P1Q5VSP4 162 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 ZNF449Q6P9G9 518 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 C11orf88Q6PI97 169 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 GBP6Q6ZN66 633 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 BTN2A1Q7KYR7 527 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 BHLHA9Q7RTU4 235 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 CPEB2Q7Z5Q1 589 aaKnown RBP5.02□□□□□ -1.61
SF3B1-210ENST00000482158 CREBRFQ8IUR6 639 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 LACC1Q8IV20 430 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 KLHL7Q8IXQ5 586 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 TMEM178AQ8NBL3 297 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 OR7A2PQ8NGA2 310 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 NCOA7Q8NI08 942 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 ATP6V1E2Q96A05 226 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 FBXO17Q96EF6 278 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 RIMS4Q9H426 269 aaPredicted RBP5.02□□□□□ -1.61
SF3B1-210ENST00000482158 OR6C2Q9NZP2 312 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 SEPT10Q9P0V9 454 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 MAN1B1Q9UKM7 699 aa5.02□□□□□ -1.61
SF3B1-210ENST00000482158 MTMR11A4FU01 709 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 NME6O75414 186 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-210ENST00000482158 VTNP04004 478 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 CTNNA1P35221 906 aaKnown RBP5.01□□□□□ -1.61
SF3B1-210ENST00000482158 YWHAHQ04917 246 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-210ENST00000482158 OPCMLQ14982 345 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 ANKRD20A4Q4UJ75 823 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 ANKRD20A8PQ5CZ79 823 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 ANKRD20A2Q5SQ80 823 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 ANKRD20A1Q5TYW2 823 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 ANKRD20A3Q5VUR7 823 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 RCOR2Q8IZ40 523 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 AMER3Q8N944 861 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 OR5AP2Q8NGF4 316 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 SUSD6Q92537 303 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 SGF29Q96ES7 293 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 LRR1Q96L50 414 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 CDCA3Q99618 268 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-210ENST00000482158 CDK19Q9BWU1 502 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 C2orf40Q9H1Z8 148 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 MAN2C1Q9NTJ4 1040 aa5.01□□□□□ -1.61
SF3B1-210ENST00000482158 STAU2Q9NUL3 570 aaKnown RBP eCLIP5.01□□□□□ -1.61
SF3B1-210ENST00000482158 ARMCX3Q9UH62 379 aaPredicted RBP5.01□□□□□ -1.61
SF3B1-210ENST00000482158 IL16Q14005 1332 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms