RNA–Protein interactions for RNA: ENST00000481409.1

USP39-215, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 447 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-215ENST00000481409 PPM1DO15297 605 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 TOX3O15405 576 aaPredicted RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 DUX1O43812 170 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 RSL1D1O76021 490 aaKnown RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 PROS1P07225 676 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 SERPINA6P08185 405 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 CDH1P12830 882 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 EZRP15311 586 aaKnown RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 TSPAN8P19075 237 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 PRDX3P30048 256 aaKnown RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 IDH3AP50213 366 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 MAZP56270 477 aaKnown RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 RPS15AP62244 130 aaKnown RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 REEP5Q00765 189 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 BTKQ06187 659 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 TCF15Q12870 199 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 TSTA3Q13630 321 aaPredicted RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 ZRSR2Q15696 482 aaKnown RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 CPSF6Q16630 551 aaKnown RBP eCLIP9.78□□□□□ -0.84
USP39-215ENST00000481409 MANEAQ5SRI9 462 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 CLEC6AQ6EIG7 209 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 ZNF425Q6IV72 752 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 WDR74Q6RFH5 385 aaPredicted RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 SPESP1Q6UW49 350 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 SPATA19Q7Z5L4 167 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 MYLK4Q86YV6 388 aaPredicted RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 PLXDC1Q8IUK5 500 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 SLC35F3Q8IY50 421 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 KYQ8NBH2 561 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 TRPV3Q8NET8 790 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 OR7G3Q8NG95 312 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 RFWD2Q8NHY2 731 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 WDR48Q8TAF3 677 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 AGR3Q8TD06 166 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 SELENOMQ8WWX9 145 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 PATE1Q8WXA2 126 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 MOCOSQ96EN8 888 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 RILPQ96NA2 401 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 CDK15Q96Q40 435 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 OR2A14Q96R47 310 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 NUF2Q9BZD4 464 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 RABEP2Q9H5N1 569 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 XKR8Q9H6D3 395 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 C1GALT1Q9NS00 363 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 GEMIN8Q9NWZ8 242 aaKnown RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 DCTN4Q9UJW0 460 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 POMT2Q9UKY4 750 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 ZNF490Q9ULM2 529 aaPredicted RBP9.78□□□□□ -0.84
USP39-215ENST00000481409 RNF11Q9Y3C5 154 aa9.78□□□□□ -0.84
USP39-215ENST00000481409 GSAPA4D1B5 854 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 OR2A25A4D2G3 310 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 KRT87PA6NCN2 255 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 ANKDD1BA6NHY2 528 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 PATE3B3GLJ2 98 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 SDHDO14521 159 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 PIP5K1BO14986 540 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 MAP3K7O43318 606 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 DIAPH2O60879 1101 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 CLEC3AO75596 197 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 LMNAP02545 664 aaKnown RBP9.77□□□□□ -0.85
USP39-215ENST00000481409 GP1BAP07359 652 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 PRR35P0CG20 571 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 CKMT1AP12532 417 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 UGT2B7P16662 529 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 LBPP18428 481 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 POLR2CP19387 275 aaPredicted RBP9.77□□□□□ -0.85
USP39-215ENST00000481409 PTX3P26022 381 aaPredicted RBP9.77□□□□□ -0.85
USP39-215ENST00000481409 MAPK1P28482 360 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 PEBP1P30086 187 aaKnown RBP9.77□□□□□ -0.85
USP39-215ENST00000481409 GSTM5P46439 218 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 MRPL19P49406 292 aaKnown RBP9.77□□□□□ -0.85
USP39-215ENST00000481409 ATP4BP51164 291 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 FOXA1P55317 472 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 CSNK1G2P78368 415 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 CUL3Q13618 768 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 SLBPQ14493 270 aaKnown RBP eCLIP9.77□□□□□ -0.85
USP39-215ENST00000481409 TCEA2Q15560 299 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 PDCD2Q16342 344 aaPredicted RBP9.77□□□□□ -0.85
USP39-215ENST00000481409 CSRP2Q16527 193 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 GSTA3Q16772 222 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 IMPG1Q17R60 797 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 ATP6AP1LQ52LC2 224 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 FAM91A1Q658Y4 838 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 LARP4Q71RC2 724 aaKnown RBP eCLIP9.77□□□□□ -0.85
USP39-215ENST00000481409 KMT5CQ86Y97 462 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 DDIASQ8IXT1 998 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 SRFBP1Q8NEF9 429 aaKnown RBP9.77□□□□□ -0.85
USP39-215ENST00000481409 FLVCR1-AS1Q8TAF5 88 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 AHCYL2Q96HN2 611 aaKnown RBP9.77□□□□□ -0.85
USP39-215ENST00000481409 APOLD1Q96LR9 279 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 LRRC37BQ96QE4 947 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 SERPINI1Q99574 410 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 CENPKQ9BS16 269 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 TUBB6Q9BUF5 446 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 GTPBP2Q9BX10 602 aaKnown RBP9.77□□□□□ -0.85
USP39-215ENST00000481409 SHCBP1LQ9BZQ2 653 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 SEMA6CQ9H3T2 930 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 TNFRSF12AQ9NP84 129 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 ACSS2Q9NR19 701 aa9.77□□□□□ -0.85
USP39-215ENST00000481409 SIRT5Q9NXA8 310 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms