RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 BCL9LQ86UU0 1499 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 DOCK9Q9BZ29 2069 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 SALL3Q9BXA9 1300 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 SLIT2O94813 1529 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 HLA-DPB1P04440 258 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 RPL10P27635 214 aaKnown RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 JAM2P57087 298 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ALG10BQ5I7T1 473 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 OR2AG1Q9H205 316 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 PACSIN3Q9UKS6 424 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 FZD10Q9ULW2 581 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 SCN11AQ9UI33 1791 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 NFAT5O94916 1531 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 VWA5B1Q5TIE3 1220 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 XKRXQ6PP77 449 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 IQCHQ86VS3 1027 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 BTBD1Q9H0C5 482 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 SLC28A3Q9HAS3 691 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ZDHHC3Q9NYG2 299 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 COL3A1P02461 1466 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 IQCF5A8MTL0 148 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 hCG_2039718K7EN88 272 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 PSMD9O00233 223 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 LGR5O75473 907 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 GRIA1P42261 906 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 LRRN1Q6UXK5 716 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 RBM12BQ8IXT5 1001 aaKnown RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 NECAB3Q96P71 396 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 MCM3APO60318 1980 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 CSTBP04080 98 aaKnown RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ITGB5P18084 799 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 DSTNP60981 165 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 MAB21L1Q13394 359 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ZNF776Q68DI1 518 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 TNFAIP8L2Q6P589 184 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 FAM43BQ6ZT52 329 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ZSCAN1Q8NBB4 408 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 PLA2G15Q8NCC3 412 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 CPT1BQ92523 772 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 S100A16Q96FQ6 103 aaKnown RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 MTERF1Q99551 399 aaKnown RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 SLC2A11Q9BYW1 496 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 EVLQ9UI08 416 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 IFT52Q9Y366 437 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 TLR4O00206 839 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 TSPAN4O14817 238 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 MRPL49Q13405 166 aaKnown RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 LPCAT4Q643R3 524 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ANKRD26P1Q6NSI1 321 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 DCDC5Q6ZRR9 648 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 BANPQ8N9N5 519 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 OR4K17Q8NGC6 315 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 CMTM7Q96FZ5 175 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 OSBPL2Q9H1P3 480 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 STXBP5LQ9Y2K9 1186 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 WASF2Q9Y6W5 498 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 KLK3P07288 261 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 IDH3AP50213 366 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 LRRC32Q14392 662 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 SYT16Q17RD7 645 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 TOR1AIP1Q5JTV8 583 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 RBM23Q86U06 439 aaKnown RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 TMEM168Q9H0V1 697 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ELAC1Q9H777 363 aaKnown RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 PEAK1Q9H792 1746 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 B8ZZF3 427 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 TREHO43280 583 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ITGA5P08648 1049 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 DRAXINQ8NBI3 349 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 UCK2Q9BZX2 261 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ZNF69Q9UC07 566 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ZFP37Q9Y6Q3 630 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 COL14A1Q05707 1796 aaKnown RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 HRGP04196 525 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ERCC1P07992 297 aaPredicted RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 HADHBP55084 474 aaKnown RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 CASP7P55210 303 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ASB9Q96DX5 294 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ZNF700Q9H0M5 742 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 ZCCHC3Q9NUD5 404 aaKnown RBP9.31□□□□□ -0.92
VEGFA-212ENST00000480614 TVP23BQ9NYZ1 205 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 TIMM22Q9Y584 194 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 MYOM1P52179 1685 aa9.31□□□□□ -0.92
VEGFA-212ENST00000480614 FFAR2O15552 330 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 GMFGO60234 142 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 NPPAP01160 153 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 HOXD8P13378 290 aaPredicted RBP9.3□□□□□ -0.92
VEGFA-212ENST00000480614 FOSL2P15408 326 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 TMBIM6P55061 237 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 ADAM17P78536 824 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 DHCR24Q15392 516 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 GFOD2Q3B7J2 385 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 VGLL2Q8N8G2 317 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 LRRC58Q96CX6 371 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 LENG8Q96PV6 779 aaPredicted RBP9.3□□□□□ -0.92
VEGFA-212ENST00000480614 ACTL8Q9H568 366 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 TMEM88BA6NKF7 163 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 TSPAN1O60635 241 aa9.3□□□□□ -0.92
VEGFA-212ENST00000480614 NELFEP18615 380 aaKnown RBP9.3□□□□□ -0.92
VEGFA-212ENST00000480614 PLA2G16P53816 162 aa9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms