RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 OR10Q1Q8NGQ4 319 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 MSLNLQ96KJ4 702 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 HTATIP2Q9BUP3 242 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 AASDHPPTQ9NRN7 309 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 CATSPERZQ9NTU4 200 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 TMEM39AQ9NV64 488 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 USP21Q9UK80 565 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 STUB1Q9UNE7 303 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 PCDHGB3Q9Y5G1 929 aa10.34□□□□□ -0.75
SIK3-210ENST00000480468 SH3D21A4FU49 640 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 BTN3A1O00481 513 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 MYL12BO14950 172 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 RGS14O43566 566 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 RFPL3O75679 317 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SCO1O75880 301 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 TSPAN12O95859 305 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 ESR1P03372 595 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SCG5P05408 212 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 PRKACAP17612 351 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 ATF4P18848 351 aaPredicted RBP10.33□□□□□ -0.76
SIK3-210ENST00000480468 MYL12AP19105 171 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 CD9P21926 228 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 MAP2K3P46734 347 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 TAF6P49848 677 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 RENBPP51606 427 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 MAP3K7CLP57077 242 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 RPL38P63173 70 aaKnown RBP10.33□□□□□ -0.76
SIK3-210ENST00000480468 DAB2P98082 770 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SNTA1Q13424 505 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 RIN1Q13671 783 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 LARS2Q15031 903 aaKnown RBP10.33□□□□□ -0.76
SIK3-210ENST00000480468 PCBP2Q15366 365 aaKnown RBP eCLIP10.33□□□□□ -0.768e-11■■■■□ 20.7
SIK3-210ENST00000480468 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.33□□□□□ -0.76
SIK3-210ENST00000480468 SIRPB2Q5JXA9 342 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 LCN1P1Q5VSP4 162 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 FAM131AQ6UXB0 335 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 ALKAL1Q6UXT8 129 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 CATSPERGQ6ZRH7 1159 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 EIF3MQ7L2H7 374 aaKnown RBP10.33□□□□□ -0.76
SIK3-210ENST00000480468 FAM124AQ86V42 546 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 NLRP8Q86W28 1048 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 GPSM1Q86YR5 675 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 CPA6Q8N4T0 437 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 OR10Z1Q8NGY1 313 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 OR4L1Q8NH43 312 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 TADA1Q96BN2 335 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 TEPSINQ96N21 525 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 PSKH2Q96QS6 385 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SPNS1Q9H2V7 528 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SYNDIG1Q9H7V2 258 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 AS3MTQ9HBK9 375 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 AMBNQ9NP70 447 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SERHLQ9NQF3 203 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SLC6A13Q9NSD5 602 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 RBFOX1Q9NWB1 397 aaKnown RBP10.33□□□□□ -0.76
SIK3-210ENST00000480468 ZNF226Q9NYT6 803 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 IL20Q9NYY1 176 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 NUDT4Q9NZJ9 180 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SEC14L4Q9UDX3 406 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SRRDQ9UH36 339 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 AP1M2Q9Y6Q5 423 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 NYNRINQ9P2P1 1898 aaKnown RBP10.33□□□□□ -0.76
SIK3-210ENST00000480468 LINC00854A0A1B0GVQ3 168 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 LOC285095A0A1B0GVY8 99 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 ATP6V1G2-DDX39BF2Z307 99 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 I3L521 148 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SLC28A1O00337 649 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 GFRA2O00451 464 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 NDUFA2O43678 99 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SLC43A1O75387 559 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 PEX11BO96011 259 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 MMP2P08253 660 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 ATXN1LP0C7T5 689 aaKnown RBP10.33□□□□□ -0.76
SIK3-210ENST00000480468 GLULP15104 373 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 CFL1P23528 166 aaKnown RBP10.33□□□□□ -0.76
SIK3-210ENST00000480468 PTPN6P29350 595 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 CD86P42081 329 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 HK3P52790 923 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 CLDN20P56880 219 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 HOXC5Q00444 222 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 RHAGQ02094 409 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 MRPL28Q13084 256 aaKnown RBP10.33□□□□□ -0.76
SIK3-210ENST00000480468 KCNC3Q14003 757 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 VEPH1Q14D04 833 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 ABRAXAS2Q15018 415 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 HKDC1Q2TB90 917 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 SV2CQ496J9 727 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 IQCCQ4KMZ1 466 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 MZT2BQ6NZ67 158 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 TEX261Q6UWH6 196 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 CBLL1Q75N03 491 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 BHLHA9Q7RTU4 235 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 TAC4Q86UU9 113 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 OR8H1Q8NGG4 311 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 TRMT61AQ96FX7 289 aaKnown RBP10.33□□□□□ -0.76
SIK3-210ENST00000480468 SAMD11Q96NU1 681 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 OR5M11Q96RB7 305 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 CAMKK2Q96RR4 588 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 CNPPD1Q9BV87 410 aa10.33□□□□□ -0.76
SIK3-210ENST00000480468 KATNAL1Q9BW62 490 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms