RNA–Protein interactions for RNA: ENST00000480237.1

LINC00173-203, long intergenic non-protein coding RNA 173, humanhuman

TSL 2 BASIC

Gene LINC00173, Length 1,597 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-203ENST00000480237 ICKQ9UPZ9 632 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 PCDHGA11Q9Y5H2 935 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 VCANP13611 3396 aa10.07□□□□□ -0.8
LINC00173-203ENST00000480237 FER1L5A0AVI2 2057 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 A0A1W2PR77 199 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 PIPSLA2A3N6 862 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 B2RBV5 119 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 GYG2O15488 501 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 LAMTOR5O43504 91 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 WNT1P04628 370 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 CELA2BP08218 269 aaPredicted RBP10.06□□□□□ -0.8
LINC00173-203ENST00000480237 C1GALT1C1LP0DN25 315 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 THRAP10827 490 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 SLC2A4P14672 509 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 PSMB5P28074 263 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 SHMT2P34897 504 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 CASP2P42575 452 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 HMGCS1Q01581 520 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 CSTF3Q12996 717 aaKnown RBP10.06□□□□□ -0.8
LINC00173-203ENST00000480237 LAPTM5Q13571 262 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 CYLC2Q14093 348 aaPredicted RBP10.06□□□□□ -0.8
LINC00173-203ENST00000480237 HIST2H2ACQ16777 129 aaPredicted RBP10.06□□□□□ -0.8
LINC00173-203ENST00000480237 PRRT3Q5FWE3 981 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 WDR45BQ5MNZ6 344 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 C6orf136Q5SQH8 315 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 CATSPEREQ5SY80 951 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 HIST2H2AA3Q6FI13 130 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 MED27Q6P2C8 311 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 NXPE4Q6UWF7 544 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 SLCO4C1Q6ZQN7 724 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 RINLQ6ZS11 566 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 Q6ZSR9 355 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 ASRGL1Q7L266 308 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 TRIM46Q7Z4K8 759 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 NRROSQ86YC3 692 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 GPBAR1Q8TDU6 330 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 SLC7A6OSQ96CW6 309 aaPredicted RBP10.06□□□□□ -0.8
LINC00173-203ENST00000480237 RAB3IPQ96QF0 476 aaPredicted RBP10.06□□□□□ -0.8
LINC00173-203ENST00000480237 NRTNQ99748 197 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 ACPTQ9BZG2 426 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 EHD1Q9H4M9 534 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 LRTM1Q9HBL6 345 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 PRMT8Q9NR22 394 aaPredicted RBP10.06□□□□□ -0.8
LINC00173-203ENST00000480237 CCDC167Q9P0B6 97 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 TAAR2Q9P1P5 351 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 KLF15Q9UIH9 416 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 PCOLCE2Q9UKZ9 415 aa10.06□□□□□ -0.8
LINC00173-203ENST00000480237 TRBV23OR9-2A0A075B6M9 112 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 CCDC163A0A0D9SF12 145 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 LOC100653049A0A140TA62 436 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 A6NCN8 305 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 H0YIV9 168 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 TLR4O00206 839 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 NR5A2O00482 541 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 SEC22BO75396 215 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 KRT34O76011 436 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 RSL1D1O76021 490 aaKnown RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 NQO1P15559 274 aaKnown RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 NUDT2P50583 147 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 NEK2P51955 445 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 PHEXP78562 749 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 MEF2AQ02078 507 aaPredicted RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 ZNF33BQ06732 778 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 PCDH1Q08174 1060 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 DNAL1Q4LDG9 190 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 ICE2Q659A1 982 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 KRT78Q8N1N4 520 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 LINC01555Q8NAE3 123 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 OR9I1Q8NGQ6 314 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 RP9Q8TA86 221 aaKnown RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 HMGCLL1Q8TB92 370 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 LCN9Q8WX39 176 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 JPH3Q8WXH2 748 aaPredicted RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 MCUR1Q96AQ8 359 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 WDR34Q96EX3 536 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 MTERF1Q99551 399 aaKnown RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 BTBD10Q9BSF8 475 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 LRRC61Q9BV99 259 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 DUSP15Q9H1R2 295 aaPredicted RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 CAAP1Q9H8G2 361 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 PELI2Q9HAT8 420 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 GEMIN8Q9NWZ8 242 aaKnown RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 C1orf109Q9NX04 203 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 ZNF624Q9P2J8 865 aaPredicted RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 EIF3LQ9Y262 564 aaKnown RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 ASCC3Q8N3C0 2202 aaKnown RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 WDR87Q6ZQQ6 2873 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 PRAMEF33A0A0G2JMD5 474 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 A0A1W2PPV9 198 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 OR5K4A6NMS3 321 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 B4DGG1 531 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 AIM2O14862 343 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 CCNDBP1O95273 360 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 VIPP01282 170 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 HSD3B1P14060 373 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 NME1P15531 152 aaKnown RBP10.05□□□□□ -0.8
LINC00173-203ENST00000480237 GPX3P22352 226 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 HSD3B2P26439 372 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 MAPK1P28482 360 aa10.05□□□□□ -0.8
LINC00173-203ENST00000480237 HOXA6P31267 233 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms