RNA–Protein interactions for RNA: ENST00000478573.6

CDC42BPA-212, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-212ENST00000478573 CHCHD3Q9NX63 227 aaKnown RBP3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 RASAL2Q9UJF2 1139 aa3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 RALYQ9UKM9 306 aaKnown RBP3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 SPIN1Q9Y657 262 aaPredicted RBP3.77□□□□□ -1.81
CDC42BPA-212ENST00000478573 CARMIL3Q8ND23 1372 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 TRAV34A0A0B4J273 112 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 ASPDHA6ND91 283 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 SLC7A4O43246 635 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 WDPCPO95876 746 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 IGHV2-70P01814 119 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 LIPFP07098 398 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 CYP11B2P19099 503 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 MPZP25189 248 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 PSMA3P25788 255 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 GLIPR1P48060 266 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 ZNF132P52740 706 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 RPL24P83731 157 aaKnown RBP3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 PRKAA1Q13131 559 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 MFAP5Q13361 173 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 DUOXA1Q1HG43 343 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 MDH1BQ5I0G3 518 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 NDUFAF5Q5TEU4 345 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 KRTAP5-1Q6L8H4 278 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 FAM171BQ6P995 826 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 LONP2Q86WA8 852 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 KBTBD3Q8NAB2 608 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 SLC4A11Q8NBS3 891 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 OR5M8Q8NGP6 311 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 C9orf43Q8TAL5 461 aaPredicted RBP3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 MOB3AQ96BX8 217 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 DHX58Q96C10 678 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 OXNAD1Q96HP4 312 aaPredicted RBP3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 SGK494Q96LW2 274 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 JAKMIP1Q96N16 626 aaKnown RBP3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 PGLYRP2Q96PD5 576 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 PLEKHF1Q96S99 279 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 CPNE1Q99829 537 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 FERMT1Q9BQL6 677 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 LRRC1Q9BTT6 524 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 THUMPD3Q9BV44 507 aaKnown RBP3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 VN1R1Q9GZP7 353 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 LRRC4Q9HBW1 653 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 TRPC7Q9HCX4 862 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 MYNNQ9NPC7 610 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 NARFQ9UHQ1 456 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 POU2F3Q9UKI9 436 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 PADI2Q9Y2J8 665 aa3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 ZFP37Q9Y6Q3 630 aaPredicted RBP3.76□□□□□ -1.81
CDC42BPA-212ENST00000478573 THSD7BQ9C0I4 1608 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 A0A1W2PS18 150 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 HYKKA2RU49 373 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 HTR3EA5X5Y0 456 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 NEMP2A6NFY4 417 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 OR6C76A6NM76 312 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 MEIS2O14770 477 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 PSMA7O14818 248 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 SYNGR3O43761 229 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 RNASEH1O60930 286 aaKnown RBP3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 ATP1A1P05023 1023 aaKnown RBP3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 MMP10P09238 476 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 ADRA2CP18825 462 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 CD22P20273 847 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 CASTP20810 708 aaKnown RBP3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 TLX1P31314 330 aaPredicted RBP3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 RFC4P35249 363 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 PSMC4P43686 418 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 LHX1P48742 406 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 BMXP51813 675 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 FUT6P51993 359 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 CAPZA1P52907 286 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 POLR2LP62875 67 aaKnown RBP3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 PITX1P78337 314 aaPredicted RBP3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 MAT1AQ00266 395 aaKnown RBP3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 SCN1BQ07699 218 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 MZT1Q08AG7 82 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 SLC39A6Q13433 755 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 TUBB2AQ13885 445 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 MPP7Q5T2T1 576 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 MFSD12Q6NUT3 480 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 C11orf57Q6ZUT1 292 aaPredicted RBP3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 FOXL2NBQ6ZUU3 175 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 PIWIL4Q7Z3Z4 852 aaKnown RBP3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 SPATA19Q7Z5L4 167 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 TLK2Q86UE8 772 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 KLHDC8BQ8IXV7 354 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 TIGD4Q8IY51 512 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 ZNF611Q8N823 705 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 RNF128Q8TEB7 428 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 SSMEM1Q8WWF3 244 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 CORO2AQ92828 525 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 MR1Q95460 341 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 ATP6V1E2Q96A05 226 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 LINGO1Q96FE5 620 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 VMP1Q96GC9 406 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 TUBB2BQ9BVA1 445 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 ARRDC1-AS1Q9H2J1 176 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 Q9N2K0 584 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 ABCF3Q9NUQ8 709 aa3.75□□□□□ -1.81
CDC42BPA-212ENST00000478573 ZNF701Q9NV72 531 aaPredicted RBP3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms