RNA–Protein interactions for RNA: ENST00000478469.5

PCCB-214, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 1 (best) BASIC

Gene PCCB, Length 4,502 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-214ENST00000478469 SDC3O75056 442 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 DHRS4L1P0CG22 281 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 CD9P21926 228 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 AOAHP28039 575 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 CD38P28907 300 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 SMIM11AP58511 58 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 TAS2R50P59544 299 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 WSCD2Q2TBF2 565 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 OR4F3Q6IEY1 312 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 AAGABQ6PD74 315 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 SYCE2Q6PIF2 218 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 SLC44A3Q8N4M1 653 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 OR2L2Q8NH16 312 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 PKP4Q99569 1192 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 MUC13Q9H3R2 512 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 BRWD1Q9NSI6 2320 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 PGRP06401 933 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 HSD3B1P14060 373 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 HOXB6P17509 224 aaKnown RBP11.63□□□□□ -0.55
PCCB-214ENST00000478469 HSD3B2P26439 372 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 CSTF2P33240 577 aaKnown RBP eCLIP11.63□□□□□ -0.55
PCCB-214ENST00000478469 DIO3P55073 304 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 UFM1P61960 85 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 GALNT1Q10472 559 aaPredicted RBP11.63□□□□□ -0.55
PCCB-214ENST00000478469 NFATC4Q14934 902 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 PCBP2Q15366 365 aaKnown RBP eCLIP11.63□□□□□ -0.55
PCCB-214ENST00000478469 USP30Q70CQ3 517 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 BNIPLQ7Z465 357 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 DCP2Q8IU60 420 aaKnown RBP11.63□□□□□ -0.55
PCCB-214ENST00000478469 DHRSXQ8N5I4 330 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 PHF10Q8WUB8 498 aaKnown RBP11.63□□□□□ -0.55
PCCB-214ENST00000478469 C17orf62Q9BQA9 187 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 TMEM79Q9BSE2 394 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 ADAP2Q9NPF8 381 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 PHF11Q9UIL8 331 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 SERTAD3Q9UJW9 196 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 MMP17Q9ULZ9 603 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 RLFQ13129 1914 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 GTPBP1O00178 669 aaKnown RBP11.63□□□□□ -0.55
PCCB-214ENST00000478469 CLOCKO15516 846 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 CST1P01037 141 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 AOC1P19801 751 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 MAOBP27338 520 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 SH3BP2P78314 561 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 C12orf40Q86WS4 652 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.63□□□□□ -0.55
PCCB-214ENST00000478469 AGAP11Q8TF27 550 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 CADM1Q9BY67 442 aaKnown RBP11.63□□□□□ -0.55
PCCB-214ENST00000478469 ZBTB26Q9HCK0 441 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 DLGAP4Q9Y2H0 992 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 NDUFB5O43674 189 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 MTPNP58546 118 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 ZNF155Q12901 538 aaPredicted RBP11.63□□□□□ -0.55
PCCB-214ENST00000478469 TRIM25Q14258 630 aaKnown RBP11.63□□□□□ -0.55
PCCB-214ENST00000478469 FAM214AQ32MH5 1076 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 CTSL3PQ5NE16 218 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 TMEM164Q5U3C3 297 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 NXPE4Q6UWF7 544 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 AMIGO2Q86SJ2 522 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 PDZD3Q86UT5 571 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 SPPL2CQ8IUH8 684 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 CAMK1GQ96NX5 476 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 TBC1D17Q9HA65 648 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 PRDM8Q9NQV8 689 aa11.63□□□□□ -0.55
PCCB-214ENST00000478469 CNOT6Q9ULM6 557 aaKnown RBP11.63□□□□□ -0.55
PCCB-214ENST00000478469 ARHGEF33A8MVX0 844 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 IGHA2P01877 340 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 AK4P27144 223 aaPredicted RBP11.62□□□□□ -0.55
PCCB-214ENST00000478469 NCBP2P52298 156 aaKnown RBP eCLIP11.62□□□□□ -0.55
PCCB-214ENST00000478469 YPEL5P62699 121 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 ZNF763Q0D2J5 394 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 SPANXN4Q5MJ08 99 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 KIAA0895LQ68EN5 471 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 KIAA1958Q8N8K9 716 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 RDH14Q9HBH5 336 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 FZD4Q9ULV1 537 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 SH3GLB1Q9Y371 365 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 SAMHD1Q9Y3Z3 626 aaKnown RBP11.62□□□□□ -0.55
PCCB-214ENST00000478469 DNAJC15Q9Y5T4 150 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 RP1L1Q8IWN7 2480 aaPredicted RBP11.62□□□□□ -0.55
PCCB-214ENST00000478469 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 A0A1W2PP18 115 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 GLULP15104 373 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 NOS3P29474 1203 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 GCKP35557 465 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 IL5RAQ01344 420 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 PPP1R3AQ16821 1122 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 TMEM52BQ4KMG9 183 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 LYSMD4Q5XG99 296 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 NOXRED1Q6NXP6 359 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 TICAM1Q8IUC6 712 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 TMEFF1Q8IYR6 380 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 RNF168Q8IYW5 571 aaPredicted RBP11.62□□□□□ -0.55
PCCB-214ENST00000478469 MAGEE2Q8TD90 523 aaPredicted RBP11.62□□□□□ -0.55
PCCB-214ENST00000478469 ZDHHC1Q8WTX9 485 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 TADA1Q96BN2 335 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 PDLIM5Q96HC4 596 aaKnown RBP11.62□□□□□ -0.55
PCCB-214ENST00000478469 TIMM29Q9BSF4 260 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 SLC6A17Q9H1V8 727 aa11.62□□□□□ -0.55
PCCB-214ENST00000478469 ATG2BQ96BY7 2078 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms