RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 SCAMP1O15126 338 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 TSC22D2O75157 780 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 F9P00740 461 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 PIGRP01833 764 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 CHKAP35790 457 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 MDH2P40926 338 aaKnown RBP0.53□□□□□ -2.32
CALD1-218ENST00000478075 PAFAH1B1P43034 410 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 PFN3P60673 137 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 PSG7Q13046 419 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 EIF4EBP1Q13541 118 aaPredicted RBP0.53□□□□□ -2.32
CALD1-218ENST00000478075 TRIM14Q14142 442 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 PDCD2Q16342 344 aaPredicted RBP0.53□□□□□ -2.32
CALD1-218ENST00000478075 TMEM198Q66K66 360 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 ZSCAN25Q6NSZ9 544 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 INO80CQ6PI98 192 aaPredicted RBP0.53□□□□□ -2.32
CALD1-218ENST00000478075 OR6T1Q8NGN1 323 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 CCSER1Q9C0I3 900 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 PLEKHA3Q9HB20 300 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 MYNNQ9NPC7 610 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 OSER1Q9NX31 292 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 PRDM4Q9UKN5 801 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 NENFQ9UMX5 172 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 MRPL11Q9Y3B7 192 aaKnown RBP0.53□□□□□ -2.32
CALD1-218ENST00000478075 MTF2Q9Y483 593 aaPredicted RBP0.53□□□□□ -2.32
CALD1-218ENST00000478075 PCDHGA5Q9Y5G8 931 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 R4GN57 208 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 PCDH11YQ9BZA8 1340 aa0.53□□□□□ -2.32
CALD1-218ENST00000478075 TRBV5-5A0A0J9YX44 114 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 A8MV72 311 aaPredicted RBP0.52□□□□□ -2.33
CALD1-218ENST00000478075 ZNF324O75467 553 aaPredicted RBP0.52□□□□□ -2.33
CALD1-218ENST00000478075 IGLV3-19P01714 112 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 PSG2P11465 335 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 TMEM11P17152 192 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 AADACP22760 399 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 SLC1A4P43007 532 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 TNFRSF4P43489 277 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 SUOXP51687 545 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 GALCP54803 685 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 RPL7AP62424 266 aaKnown RBP0.52□□□□□ -2.33
CALD1-218ENST00000478075 CEBPZQ03701 1054 aaKnown RBP0.52□□□□□ -2.33
CALD1-218ENST00000478075 NIPAL4Q0D2K0 466 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 LMOD3Q0VAK6 560 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 TMEM115Q12893 351 aaPredicted RBP0.52□□□□□ -2.33
CALD1-218ENST00000478075 SF3A2Q15428 464 aaKnown RBP0.52□□□□□ -2.33
CALD1-218ENST00000478075 FAM69AQ5T7M9 428 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 CPOQ8IVL8 374 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 ARID3BQ8IVW6 561 aaPredicted RBP0.52□□□□□ -2.33
CALD1-218ENST00000478075 OLFM1Q99784 485 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 DPAGT1Q9H3H5 408 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 DNAJC18Q9H819 358 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 RIC8AQ9NPQ8 531 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 ITM2CQ9NQX7 267 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 GKN1Q9NS71 199 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 POLLQ9UGP5 575 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 SPATA2Q9UM82 520 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 MOKQ9UQ07 419 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 MRPS18CQ9Y3D5 142 aaKnown RBP0.52□□□□□ -2.33
CALD1-218ENST00000478075 CYP46A1Q9Y6A2 500 aa0.52□□□□□ -2.33
CALD1-218ENST00000478075 TRAV9-2A0A087WT02 112 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 TRBV4-1A0A0J9YWV2 114 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 ZSCAN5CA6NGD5 496 aaPredicted RBP0.51□□□□□ -2.33
CALD1-218ENST00000478075 ZFP92A6NM28 416 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 HEPACAM2A8MVW5 462 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 HOXC11O43248 304 aaPredicted RBP0.51□□□□□ -2.33
CALD1-218ENST00000478075 ECE2O60344 883 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 IGKV1D-16P01601 117 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 CPN1P15169 458 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 DCDC1P59894 354 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 GNB2P62879 340 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 VAMP2P63027 116 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 KLC1Q07866 573 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 ZNF415Q09FC8 603 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 KRTAP13-4Q3LI77 160 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 VWA2Q5GFL6 755 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 IGFL1Q6UW32 110 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 NAXDQ8IW45 347 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 CEP57L1Q8IYX8 460 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 TMEM116Q8NCL8 245 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 ZNF670Q9BS34 389 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 IKZF5Q9H5V7 419 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 ISG20L2Q9H9L3 353 aaKnown RBP0.51□□□□□ -2.33
CALD1-218ENST00000478075 PCDHB16Q9NRJ7 776 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 NECAP2Q9NVZ3 263 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 NEU3Q9UQ49 428 aa0.51□□□□□ -2.33
CALD1-218ENST00000478075 NLRC5Q86WI3 1866 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 TNRQ92752 1358 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 A0A0G2JLM5 398 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 ZNF749O43361 778 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 OR10H2O60403 315 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 ATP1B1P05026 303 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 ZNF823P16415 610 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 EPHA8P29322 1005 aaPredicted RBP0.5□□□□□ -2.33
CALD1-218ENST00000478075 GPR183P32249 361 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 IST1P53990 364 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 TPD52P55327 224 aaPredicted RBP0.5□□□□□ -2.33
CALD1-218ENST00000478075 MLF2Q15773 248 aaPredicted RBP0.5□□□□□ -2.33
CALD1-218ENST00000478075 TMEM266Q2M3C6 531 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 ALDH1L2Q3SY69 923 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 POM121L1PQ3SYA9 428 aa0.5□□□□□ -2.33
CALD1-218ENST00000478075 OTPQ5XKR4 325 aa0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms