RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 HAS3O00219 553 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 CHRNA1P02708 482 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 KIAA0930Q6ICG6 404 aaPredicted RBP18.11■□□□□ 0.49
VARS2-209ENST00000477288 OXR1Q8N573 874 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 AMBNQ9NP70 447 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 E2F3O00716 465 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 IL33O95760 270 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 TIGD6Q17RP2 521 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 GPR33Q49SQ1 333 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 PDSS1Q5T2R2 415 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 SYPL2Q5VXT5 272 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 LYSMD3Q7Z3D4 306 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 KLHL6Q8WZ60 621 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 MAF1Q9H063 256 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 ZNF700Q9H0M5 742 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 TFB2MQ9H5Q4 396 aaKnown RBP18.11■□□□□ 0.49
VARS2-209ENST00000477288 TMEM165Q9HC07 324 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 VNN2O95498 520 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 IFNA21P01568 189 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 RAP2AP10114 183 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 LRP8Q14114 963 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 TEAD2Q15562 447 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 SLC9A4Q6AI14 798 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 THEM6Q8WUY1 208 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 TMEM203Q969S6 136 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 EIF2B3Q9NR50 452 aaKnown RBP18.11■□□□□ 0.49
VARS2-209ENST00000477288 P2RX2Q9UBL9 471 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 CCND3P30281 292 aaPredicted RBP18.11■□□□□ 0.49
VARS2-209ENST00000477288 GRASPQ7Z6J2 395 aaPredicted RBP18.11■□□□□ 0.49
VARS2-209ENST00000477288 ZC3H10Q96K80 434 aaKnown RBP18.11■□□□□ 0.49
VARS2-209ENST00000477288 TMED9Q9BVK6 235 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 TLR9Q9NR96 1032 aa18.11■□□□□ 0.49
VARS2-209ENST00000477288 FAM234BA2RU67 622 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 OPN1SWP03999 348 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 IFI30P13284 250 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 LHCGRP22888 699 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 ARPC4P59998 168 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 ZSCAN4Q8NAM6 433 aaPredicted RBP18.1■□□□□ 0.49
VARS2-209ENST00000477288 CCDC107Q8WV48 283 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 TM9SF2Q99805 663 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 ZNF350Q9GZX5 532 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 ST6GALNAC4Q9H4F1 302 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 ENY2Q9NPA8 101 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 CYTH4Q9UIA0 394 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 FZD4Q9ULV1 537 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 ILVBLA1L0T0 632 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 AQP4P55087 323 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 PER3P56645 1201 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 DSTNP60981 165 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 PTP4A2Q12974 167 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 SSX6Q7RTT6 188 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 ZNF565Q8N9K5 539 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 DKK3Q9UBP4 350 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 VPS29Q9UBQ0 182 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 DNAJB9Q9UBS3 223 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 DKKL1Q9UK85 242 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 MED1Q15648 1581 aaPredicted RBP18.1■□□□□ 0.49
VARS2-209ENST00000477288 H3BNX3 289 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 ATP1B2P14415 290 aaPredicted RBP18.1■□□□□ 0.49
VARS2-209ENST00000477288 ARRB1P49407 418 aaPredicted RBP18.1■□□□□ 0.49
VARS2-209ENST00000477288 PAQR3Q6TCH7 311 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 UTS2RQ9UKP6 389 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 TMEM98Q9Y2Y6 226 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 TIMM8BQ9Y5J9 83 aaPredicted RBP18.1■□□□□ 0.49
VARS2-209ENST00000477288 TLL2Q9Y6L7 1015 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 SQORQ9Y6N5 450 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 RNF225M0QZC1 329 aaPredicted RBP18.1■□□□□ 0.49
VARS2-209ENST00000477288 SLC3A1Q07837 685 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 SLC25A25Q6KCM7 469 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 TMEM175Q9BSA9 504 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 IRF2BPLQ9H1B7 796 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 ITM2CQ9NQX7 267 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 CNTN3Q9P232 1028 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 RBPJLQ9UBG7 517 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 KCNK6Q9Y257 313 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 PCDHGB1Q9Y5G3 927 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 ALG5Q9Y673 324 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 HCKP08631 526 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 SNTA1Q13424 505 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 TMEM44Q2T9K0 475 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 GALNT15Q8N3T1 639 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 BPIFB1Q8TDL5 484 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 IL4I1Q96RQ9 567 aa18.1■□□□□ 0.49
VARS2-209ENST00000477288 IGLV3-22A0A075B6J6 115 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 CLDN25C9JDP6 229 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 BCHEP06276 602 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 ADGRE1Q14246 886 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 MARCH9Q86YJ5 346 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 SLC7A6OSQ96CW6 309 aaPredicted RBP18.09■□□□□ 0.49
VARS2-209ENST00000477288 CMTM7Q96FZ5 175 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 ZNF285Q96NJ3 590 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 SPATA7Q9P0W8 599 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 NUP50Q9UKX7 468 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 PLAGL1Q9UM63 463 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 ATRNL1Q5VV63 1379 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 HMGCS1Q01581 520 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 SIRPB2Q5JXA9 342 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 FIP1L1Q6UN15 594 aaKnown RBP18.09■□□□□ 0.49
VARS2-209ENST00000477288 SLC9B2Q86UD5 537 aa18.09■□□□□ 0.49
VARS2-209ENST00000477288 A0A1B0GVT2 93 aa18.09■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms