RNA–Protein interactions for RNA: ENST00000477243.1

HMGN4-202, Transcript of high mobility group nucleosomal binding domain 4, humanhuman

TSL 3

Gene HMGN4, Length 113 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN4-202ENST00000477243 VPS54Q9P1Q0 977 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 CTTNBP2NLQ9P2B4 639 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 RHCGQ9UBD6 479 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 PEF1Q9UBV8 284 aaKnown RBP2.79□□□□□ -1.96
HMGN4-202ENST00000477243 BARX2Q9UMQ3 279 aaPredicted RBP2.79□□□□□ -1.96
HMGN4-202ENST00000477243 ERVK-11Q9UQG0 969 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 B3GNT3Q9Y2A9 372 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 PADI2Q9Y2J8 665 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 LSM4Q9Y4Z0 139 aaKnown RBP2.79□□□□□ -1.96
HMGN4-202ENST00000477243 WDR87Q6ZQQ6 2873 aa2.79□□□□□ -1.96
HMGN4-202ENST00000477243 LMTK2Q8IWU2 1503 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 HYDINQ4G0P3 5121 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 EPPK1P58107 5090 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 NBPF19A0A087WUL8 3843 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 KAT6AQ92794 2004 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 SMG6Q86US8 1419 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 F8P00451 2351 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 PRAMEF33A0A0G2JMD5 474 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 A0A1W2PN81 502 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 A0A1W2PRX2 142 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 KANSL1LA0AUZ9 987 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 C1orf226A1L170 272 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 A1L4Q6 167 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 MAGEB16A2A368 324 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 PIPSLA2A3N6 862 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 HMX2A2RU54 273 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TYW5A2RUC4 315 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 C17orf102A2RUQ5 167 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 MBLAC1A4D2B0 266 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ANKDD1BA6NHY2 528 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CBY3A6NI87 242 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 DUXAA6NLW8 204 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 OR52A4PA6NMU1 304 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ANKRD30BLA7E2S9 258 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 C17orf100A8MU93 164 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 MEI4A8MW99 385 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 FAM157AC9JC47 383 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 FAM229AH3BQW9 127 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 SLC28A1O00337 649 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 POLR1CO15160 346 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CYP27B1O15528 508 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 FLRT2O43155 660 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CYP26A1O43174 497 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ZNF208O43345 1280 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 NME2P1O60361 137 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ACSL4O60488 711 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 PRAMEF10O60809 474 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 SDC3O75056 442 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CSTAP01040 98 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 IGHEP01854 428 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 F13BP05160 661 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 DDX5P17844 614 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TGM2P21980 687 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CPN2P22792 545 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 GLDCP23378 1020 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 DPP4P27487 766 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 PSMB4P28070 264 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TYK2P29597 1187 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 AKT2P31751 481 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 GKP32189 559 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 SHMT1P34896 483 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CHRNA7P36544 502 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 SLC1A3P43003 542 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ALDH3B1P43353 468 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CDX1P47902 265 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 NCKAP1LP55160 1127 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 YWHAGP61981 247 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 RPS7P62081 194 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 DLK1P80370 383 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 SARNPP82979 210 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ADORA2A-AS1P86434 159 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 CDK3Q00526 305 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 EGR4Q05215 589 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 SREBF2Q12772 1141 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ITGADQ13349 1161 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 DRP2Q13474 957 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TP53BP2Q13625 1128 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TOB2Q14106 344 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 SYT16Q17RD7 645 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 EXOC3L2Q2M3D2 409 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TBC1D25Q3MII6 688 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 GPAT3Q53EU6 434 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 FSCBQ5H9T9 825 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 C10orf120Q5SQS8 335 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 PHYHD1Q5SRE7 291 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 LDLRAP1Q5SW96 308 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TSTD2Q5T7W7 516 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 LCE2DQ5TA82 110 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 AGBL4Q5VU57 503 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 DCAF12L2Q5VW00 463 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 LYSMD4Q5XG99 296 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ZNF385CQ66K41 422 aaPredicted RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 RNF43Q68DV7 783 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TRMT10BQ6PF06 316 aaKnown RBP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 LARP4Q71RC2 724 aaKnown RBP eCLIP2.78□□□□□ -1.96
HMGN4-202ENST00000477243 ANO5Q75V66 913 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 RNF144BQ7Z419 303 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 PAQR7Q86WK9 346 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 KLBQ86Z14 1044 aa2.78□□□□□ -1.96
HMGN4-202ENST00000477243 TMPRSS6Q8IU80 811 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms