RNA–Protein interactions for RNA: ENST00000477182.5

LSM2-212, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM2, Length 767 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-212ENST00000477182 SUPT3HB4E1H0 165 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 SLC16A5O15375 505 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 PRPF4O43172 522 aaKnown RBP eCLIP11.14□□□□□ -0.63
LSM2-212ENST00000477182 PLIN3O60664 434 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 KERAO60938 352 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 SUPT3HO75486 399 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 C1orf105O95561 183 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 DLGAP3O95886 979 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 PROCP04070 461 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 RBP1P09455 135 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 PRF1P14222 555 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 SLC2A4P14672 509 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 CYP2A7P20853 494 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 DLSTP36957 453 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 SLC19A1P41440 591 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 MAPK9P45984 424 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 KCNC1P48547 511 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 GPLD1P80108 840 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 PRKG2Q13237 762 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 SP140Q13342 867 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 MPP2Q14168 576 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 KRT33BQ14525 404 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 ZXDCQ2QGD7 858 aaPredicted RBP11.14□□□□□ -0.63
LSM2-212ENST00000477182 CCSMST1Q4G0I0 132 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 NADK2Q4G0N4 442 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 EEF1AKMT2Q5JPI9 291 aaKnown RBP11.14□□□□□ -0.63
LSM2-212ENST00000477182 MBOAT1Q6ZNC8 495 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 FRA10AC1Q70Z53 315 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 GPSM1Q86YR5 675 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 TRIM48Q8IWZ4 208 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 SFRP1Q8N474 314 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 ANKRD42Q8N9B4 389 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 ARMC2Q8NEN0 867 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 STAG3L4Q8TBR4 150 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 SLC37A2Q8TED4 501 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 FAM111AQ96PZ2 611 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 ATOH8Q96SQ7 321 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 CTRCQ99895 268 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 MRPL57Q9BQC6 102 aaKnown RBP11.14□□□□□ -0.63
LSM2-212ENST00000477182 MRPL46Q9H2W6 279 aaKnown RBP11.14□□□□□ -0.63
LSM2-212ENST00000477182 PARVBQ9HBI1 364 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 SLAMF7Q9NQ25 335 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 MAP10Q9P2G4 905 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 CPSF2Q9P2I0 782 aaKnown RBP11.14□□□□□ -0.63
LSM2-212ENST00000477182 PDP2Q9P2J9 529 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 KCND3Q9UK17 655 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 PDE10AQ9Y233 779 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 TDRKHQ9Y2W6 561 aaKnown RBP11.14□□□□□ -0.63
LSM2-212ENST00000477182 PCDHGA9Q9Y5G4 932 aaKnown RBP11.14□□□□□ -0.63
LSM2-212ENST00000477182 HEBP2Q9Y5Z4 205 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 PCNX1Q96RV3 2341 aa11.14□□□□□ -0.63
LSM2-212ENST00000477182 IGHV1OR21-1A0A087WYE8 117 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 KIR2DS5A0A0G2JLQ3 304 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 A0A0G2JNG1 304 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 ARHGAP10A1A4S6 786 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 PABPN1LA6NDY0 278 aaKnown RBP11.13□□□□□ -0.63
LSM2-212ENST00000477182 KIR2DS3K7RE56 304 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 UBXN8O00124 270 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 POLR1CO15160 346 aaPredicted RBP11.13□□□□□ -0.63
LSM2-212ENST00000477182 SNRNP200O75643 2136 aaKnown RBP11.13□□□□□ -0.63
LSM2-212ENST00000477182 RPN2P04844 631 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 ENO2P09104 434 aaPredicted RBP11.13□□□□□ -0.63
LSM2-212ENST00000477182 SBK3P0C264 359 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 MPSTP25325 297 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 UBE2IP63279 158 aaKnown RBP11.13□□□□□ -0.63
LSM2-212ENST00000477182 KIR2DS5Q14953 304 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 PPP1R3AQ16821 1122 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 CCDC153Q494R4 210 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 NKAIN2Q5VXU1 208 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 TTC23LQ6PF05 361 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 DCUN1D3Q8IWE4 304 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 TBC1D21Q8IYX1 336 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 TMEM151AQ8N4L1 468 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 CCDC63Q8NA47 563 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 OR5K2Q8NHB8 316 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 RHEBL1Q8TAI7 183 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 MCOLN3Q8TDD5 553 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 SLC25A23Q9BV35 468 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 TRIM54Q9BYV2 358 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 MVB12BQ9H7P6 319 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 CD274Q9NZQ7 290 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 CPNE7Q9UBL6 633 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 PLAGL1Q9UM63 463 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 OARD1Q9Y530 152 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 COLEC10Q9Y6Z7 277 aa11.13□□□□□ -0.63
LSM2-212ENST00000477182 CCDC189A1A4V9 331 aa11.12□□□□□ -0.63
LSM2-212ENST00000477182 CDC14CA4D256 554 aa11.12□□□□□ -0.63
LSM2-212ENST00000477182 NCF1BA6NI72 391 aaPredicted RBP11.12□□□□□ -0.63
LSM2-212ENST00000477182 SYCE1LA8MT33 242 aa11.12□□□□□ -0.63
LSM2-212ENST00000477182 NCF1CA8MVU1 366 aaPredicted RBP11.12□□□□□ -0.63
LSM2-212ENST00000477182 TARM1B6A8C7 271 aa11.12□□□□□ -0.63
LSM2-212ENST00000477182 TM9SF1O15321 606 aa11.12□□□□□ -0.63
LSM2-212ENST00000477182 ZWINTO95229 277 aa11.12□□□□□ -0.63
LSM2-212ENST00000477182 GUCA1CO95843 209 aa11.12□□□□□ -0.63
LSM2-212ENST00000477182 VIPP01282 170 aa11.12□□□□□ -0.63
LSM2-212ENST00000477182 S100BP04271 92 aaPredicted RBP11.12□□□□□ -0.63
LSM2-212ENST00000477182 FURINP09958 794 aa11.12□□□□□ -0.63
LSM2-212ENST00000477182 NCF1P14598 390 aaPredicted RBP11.12□□□□□ -0.63
LSM2-212ENST00000477182 XRCC1P18887 633 aaPredicted RBP11.12□□□□□ -0.63
LSM2-212ENST00000477182 F8A1P23610 371 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms