RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 RBP3P10745 1247 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 EEF1DP29692 281 aaKnown RBP10.75□□□□□ -0.69
BRCA1-213ENST00000476777 DNAJA1P31689 397 aaKnown RBP10.75□□□□□ -0.69
BRCA1-213ENST00000476777 BDKRB1P46663 353 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 ST13P50502 369 aaKnown RBP10.75□□□□□ -0.69
BRCA1-213ENST00000476777 IST1P53990 364 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 EIF3EP60228 445 aaKnown RBP10.75□□□□□ -0.69
BRCA1-213ENST00000476777 HKDC1Q2TB90 917 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 RNFT1Q5M7Z0 435 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 CCDC181Q5TID7 509 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 LRRC8BQ6P9F7 803 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 FGD2Q7Z6J4 655 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 LUZP1Q86V48 1076 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 TGIF2LYQ8IUE0 185 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 CSNK1A1LQ8N752 337 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 DNAAF3Q8N9W5 541 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 OR8K1Q8NGG5 319 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 OR13J1Q8NGT2 312 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 NRGNQ92686 78 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 KRT35Q92764 455 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 RAD51AP1Q96B01 352 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 LRRC45Q96CN5 670 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 MMABQ96EY8 250 aaPredicted RBP10.75□□□□□ -0.69
BRCA1-213ENST00000476777 ZNF354BQ96LW1 612 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 ALS2CR12Q96Q35 445 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 CHP1Q99653 195 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 NPAS2Q99743 824 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 FAM118BQ9BPY3 351 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 UTP23Q9BRU9 249 aaKnown RBP10.75□□□□□ -0.69
BRCA1-213ENST00000476777 DPH7Q9BTV6 452 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 CARD6Q9BX69 1037 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 CXXC4Q9H2H0 198 aa10.75□□□□□ -0.69
BRCA1-213ENST00000476777 A0A0A6YYC8 382 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-213ENST00000476777 A0A0U1RQJ8 604 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 MACROD2A1Z1Q3 448 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 I3L1I5 382 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-213ENST00000476777 PRRG2O14669 202 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 MAN1A2O60476 641 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 C1orf105O95561 183 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 MBD3O95983 291 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 ANXA5P08758 320 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 CD46P15529 392 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 AOAHP28039 575 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 MAT1AQ00266 395 aaKnown RBP10.74□□□□□ -0.69
BRCA1-213ENST00000476777 TFF3Q07654 80 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 FASTKQ14296 549 aaKnown RBP10.74□□□□□ -0.69
BRCA1-213ENST00000476777 NAA25Q14CX7 972 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 PARP6Q2NL67 630 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 BTBD16Q32M84 506 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 CCDC38Q502W7 563 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 GARNL3Q5VVW2 1013 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 TTC23LQ6PF05 361 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 DARS2Q6PI48 645 aaKnown RBP10.74□□□□□ -0.69
BRCA1-213ENST00000476777 LANCL3Q6ZV70 420 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 GALNTL5Q7Z4T8 443 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 CPEB2Q7Z5Q1 589 aaKnown RBP10.74□□□□□ -0.69
BRCA1-213ENST00000476777 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-213ENST00000476777 CRLF3Q8IUI8 442 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 EID3Q8N140 333 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 KRT222Q8N1A0 295 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 MARVELD2Q8N4S9 558 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 TMEM178AQ8NBL3 297 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 METTL21AQ8WXB1 218 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 HDAC10Q969S8 669 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 CCDC42Q96M95 316 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 CYTH2Q99418 400 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 FOXC2Q99958 501 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 PLCD4Q9BRC7 762 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 TSSK1BQ9BXA7 367 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 VN1R1Q9GZP7 353 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 DRC3Q9H069 523 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 LRRC40Q9H9A6 602 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 NHEJ1Q9H9Q4 299 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-213ENST00000476777 COQ3Q9NZJ6 369 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 INTUQ9ULD6 942 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 TTC7AQ9ULT0 858 aaPredicted RBP10.74□□□□□ -0.69
BRCA1-213ENST00000476777 NFS1Q9Y697 457 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 SCN3AQ9NY46 2000 aa10.74□□□□□ -0.69
BRCA1-213ENST00000476777 RTTNQ86VV8 2226 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 IGKV1-8A0A0C4DH67 115 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 FOXO6A8MYZ6 492 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 PJA2O43164 708 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 PHF2O75151 1096 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 VPS26AO75436 327 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 NEURL1O76050 574 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 METTL18O95568 372 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 GOT2P00505 430 aaKnown RBP10.73□□□□□ -0.69
BRCA1-213ENST00000476777 SP1P08047 785 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 KLK2P20151 261 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 HADHBP55084 474 aaKnown RBP10.73□□□□□ -0.69
BRCA1-213ENST00000476777 COPS2P61201 443 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 SNRPNP63162 240 aaKnown RBP10.73□□□□□ -0.69
BRCA1-213ENST00000476777 SEMA3AQ14563 771 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 MEP1AQ16819 746 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 AFTPHQ6ULP2 937 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 ZNF534Q76KX8 674 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 TMEM200AQ86VY9 491 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 PAQR7Q86WK9 346 aa10.73□□□□□ -0.69
BRCA1-213ENST00000476777 DMRTC2Q8IXT2 367 aaPredicted RBP10.73□□□□□ -0.69
BRCA1-213ENST00000476777 SHISA5Q8N114 240 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms