RNA–Protein interactions for RNA: ENST00000476413.1

VPS50-212, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 381 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-212ENST00000476413 CIDEAO60543 219 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 RTN2O75298 545 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 DFFBO76075 338 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 NADKO95544 446 aaPredicted RBP5.36□□□□□ -1.55
VPS50-212ENST00000476413 NGFP01138 241 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 GPIP06744 558 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 DLATP10515 647 aaKnown RBP5.36□□□□□ -1.55
VPS50-212ENST00000476413 F3P13726 295 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 CEACAM8P31997 349 aaPredicted RBP5.36□□□□□ -1.55
VPS50-212ENST00000476413 CASP3P42574 277 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 POU3F1Q03052 451 aaPredicted RBP5.36□□□□□ -1.55
VPS50-212ENST00000476413 ACTN3Q08043 901 aaPredicted RBP5.36□□□□□ -1.55
VPS50-212ENST00000476413 RBBP7Q16576 425 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 ZNF789Q5FWF6 425 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 UGT3A1Q6NUS8 523 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 GPR141Q7Z602 305 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 AQP12AQ8IXF9 295 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 KBTBD8Q8NFY9 601 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 TM9SF4Q92544 642 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 BCL2L2Q92843 193 aaPredicted RBP5.36□□□□□ -1.55
VPS50-212ENST00000476413 TSACCQ96A04 125 aaPredicted RBP5.36□□□□□ -1.55
VPS50-212ENST00000476413 SDCBP2Q9H190 292 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 RAVER2Q9HCJ3 691 aaKnown RBP5.36□□□□□ -1.55
VPS50-212ENST00000476413 PNPLA3Q9NST1 481 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 NOCTQ9UK39 431 aaKnown RBP5.36□□□□□ -1.55
VPS50-212ENST00000476413 FBXL5Q9UKA1 691 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 CHKBQ9Y259 395 aa5.36□□□□□ -1.55
VPS50-212ENST00000476413 ACEP12821 1306 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 ILVBLA1L0T0 632 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 TMEM150CB9EJG8 249 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 ZNF197O14709 1029 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 TTI1O43156 1089 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 FGF17O60258 216 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 BAG2O95816 211 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 MOCS2O96007 188 aaPredicted RBP5.35□□□□□ -1.55
VPS50-212ENST00000476413 IER3P46695 156 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 GLIPR1P48060 266 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 LINC01547P58512 204 aaPredicted RBP5.35□□□□□ -1.55
VPS50-212ENST00000476413 KRTAP10-11P60412 298 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 IL10RBQ08334 325 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 TAF13Q15543 124 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 CDC37Q16543 378 aaPredicted RBP5.35□□□□□ -1.55
VPS50-212ENST00000476413 PDLIM3Q53GG5 364 aaPredicted RBP5.35□□□□□ -1.55
VPS50-212ENST00000476413 C20orf194Q5TEA3 1177 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 PHLDB2Q86SQ0 1253 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 SFRP1Q8N474 314 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 STPG4Q8N801 248 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 LRTM2Q8N967 370 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 SPC24Q8NBT2 197 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 ZNF524Q96C55 264 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 C4orf45Q96LM5 186 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 SLC5A7Q9GZV3 580 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 RIMS4Q9H426 269 aaPredicted RBP5.35□□□□□ -1.55
VPS50-212ENST00000476413 MID1IP1Q9NPA3 183 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 CHST11Q9NPF2 352 aa5.35□□□□□ -1.55
VPS50-212ENST00000476413 FAM172BPA6NC97 362 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 FPGTO14772 594 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 SLC22A3O75751 556 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 GLCEO94923 617 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 TGFB3P10600 412 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 VCLP18206 1134 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 LHCGRP22888 699 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 ITGA3P26006 1051 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 PIK3R1P27986 724 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 TIMP3P35625 211 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 NPBWR1P48145 328 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 UBXN1Q04323 297 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 KRTAP1-1Q07627 177 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 AP1B1Q10567 949 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 EXT1Q16394 746 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.34□□□□□ -1.55
VPS50-212ENST00000476413 LCE1AQ5T7P2 110 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 KLHL10Q6JEL2 608 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 RAPH1Q70E73 1250 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 SLC16A9Q7RTY1 509 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 CPEB2Q7Z5Q1 589 aaKnown RBP5.34□□□□□ -1.55
VPS50-212ENST00000476413 ANKRD46Q86W74 232 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 CCDC83Q8IWF9 413 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 OR4C3Q8NH37 302 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 HPSE2Q8WWQ2 592 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 PIK3R3Q92569 461 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 WBP2Q969T9 261 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 PANX3Q96QZ0 392 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 CTAGE1Q96RT6 745 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 PI4K2AQ9BTU6 479 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 PANK2Q9BZ23 570 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 ACPTQ9BZG2 426 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 THAP2Q9H0W7 228 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 ZNF334Q9HCZ1 680 aaPredicted RBP5.34□□□□□ -1.55
VPS50-212ENST00000476413 MRPL17Q9NRX2 175 aaKnown RBP5.34□□□□□ -1.55
VPS50-212ENST00000476413 INTS9Q9NV88 658 aaKnown RBP5.34□□□□□ -1.55
VPS50-212ENST00000476413 ZNF624Q9P2J8 865 aaPredicted RBP5.34□□□□□ -1.55
VPS50-212ENST00000476413 TNNQ9UQP3 1299 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 RUVBL2Q9Y230 463 aaKnown RBP5.34□□□□□ -1.55
VPS50-212ENST00000476413 R4GN57 208 aa5.34□□□□□ -1.55
VPS50-212ENST00000476413 AKAP3O75969 853 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 C8orf89P0DMQ9 161 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 ERVK-10P10266 1014 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 MAGEB1P43366 347 aa5.33□□□□□ -1.56
VPS50-212ENST00000476413 NME5P56597 212 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms