RNA–Protein interactions for RNA: ENST00000476217.5

SSR3-206, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 3 BASIC

Gene SSR3, Length 807 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-206ENST00000476217 RNF103O00237 685 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 TRDMT1O14717 391 aaKnown RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 NDC80O14777 642 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 TSPAN3O60637 253 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 NEBLO76041 1014 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 METTL18O95568 372 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 OLFM2O95897 454 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 ZSCAN5DPP0CG00 497 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 DHRS4L1P0CG22 281 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 PEPDP12955 493 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 CEBPBP17676 345 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 TNFRSF8P28908 595 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 OR1E1P30953 314 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 HOXC13P31276 330 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 STIP1P31948 543 aaKnown RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 CCR2P41597 374 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 RPL21P46778 160 aaKnown RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 POLD2P49005 469 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 BASP1P80723 227 aaKnown RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 SLC7A9P82251 487 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 ZNF260Q3ZCT1 412 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 LEXMQ3ZCV2 418 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 RUNDC3AQ59EK9 446 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 TCEAL5Q5H9L2 206 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 RARS2Q5T160 578 aaKnown RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 DUPD1Q68J44 220 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 NADSYN1Q6IA69 706 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 FBXL22Q6P050 247 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 MTFR2Q6P444 385 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 RFWD3Q6PCD5 774 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 SYT13Q7L8C5 426 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 PRUNE1Q86TP1 453 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 CAMK1DQ8IU85 385 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 SLC25A41Q8N5S1 370 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 NPWQ8N729 165 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 ZNF366Q8N895 744 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 RTL3Q8N8U3 475 aaKnown RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 BBOF1Q8ND07 529 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 HTR3CQ8WXA8 447 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 ANKRD7Q92527 254 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 SLC25A28Q96A46 364 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 SH3KBP1Q96B97 665 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 ZNF707Q96C28 371 aaPredicted RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 LRRC45Q96CN5 670 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 MSI2Q96DH6 328 aaKnown RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 TCEAL4Q96EI5 215 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 CELF6Q96J87 481 aaKnown RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 OLFM3Q96PB7 478 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 SLC22A12Q96S37 553 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 FMO2Q99518 471 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 LGMNQ99538 433 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 IFT27Q9BW83 186 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 CADM1Q9BY67 442 aaKnown RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 ACTR5Q9H9F9 607 aaPredicted RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 NOD2Q9HC29 1040 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 GDF3Q9NR23 364 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 TMEM248Q9NWD8 314 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 MTRF1LQ9UGC7 380 aaKnown RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 ANAPC5Q9UJX4 755 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 AGO1Q9UL18 857 aaKnown RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 NEU3Q9UQ49 428 aa5.17□□□□□ -1.58
SSR3-206ENST00000476217 ZFP37Q9Y6Q3 630 aaPredicted RBP5.17□□□□□ -1.58
SSR3-206ENST00000476217 IGLV3-10A0A075B6K4 115 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.16□□□□□ -1.58
SSR3-206ENST00000476217 TMEM272A0A1B0GTI8 110 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 A0A1B0GVM2 712 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 ARHGAP42A6NI28 874 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 NPIPB13A6NJU9 1138 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 CD8B2A6NJW9 211 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 NPIPB5A8MRT5 1133 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 NPIPB4C9JG80 1138 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 H0Y626 953 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 KCNK1O00180 336 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 INSIG1O15503 277 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 LINC01565O15544 149 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 TBL1XO60907 577 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 SEC31AO94979 1220 aaKnown RBP5.16□□□□□ -1.58
SSR3-206ENST00000476217 TOMM40O96008 361 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 RHOCP08134 193 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 MYZAPP0CAP1 466 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 ETS1P14921 441 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 H2AFXP16104 143 aaPredicted RBP5.16□□□□□ -1.58
SSR3-206ENST00000476217 RPL22P35268 128 aaKnown RBP5.16□□□□□ -1.58
SSR3-206ENST00000476217 GARSP41250 739 aaKnown RBP5.16□□□□□ -1.58
SSR3-206ENST00000476217 LMAN1P49257 510 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 RASSF2P50749 326 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 NDST2P52849 883 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 PLTPP55058 493 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 CDH4P55283 916 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 RPS24P62847 133 aaKnown RBP5.16□□□□□ -1.58
SSR3-206ENST00000476217 CAV1Q03135 178 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 PPIDQ08752 370 aaKnown RBP5.16□□□□□ -1.58
SSR3-206ENST00000476217 GALNT2Q10471 571 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 HYAL1Q12794 435 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 ZNF177Q13360 481 aaPredicted RBP5.16□□□□□ -1.58
SSR3-206ENST00000476217 CDH18Q13634 790 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 TRADDQ15628 312 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 PRTGQ2VWP7 1150 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 PARP15Q460N3 678 aa5.16□□□□□ -1.58
SSR3-206ENST00000476217 ALFQ53S48 1182 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms