RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 ZNF26P17031 533 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-211ENST00000476215 CEBPBP17676 345 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 EPORP19235 508 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 SP100P23497 879 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-211ENST00000476215 ALDH1B1P30837 517 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 DNA2P51530 1060 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 NAGLUP54802 743 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 MFAP3P55082 362 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 RBP5P82980 135 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 MYL7Q01449 175 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 TMEM187Q14656 261 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 RBBP7Q16576 425 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 KRTAP27-1Q3LI81 207 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 ZFP69Q49AA0 526 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 GPR33Q49SQ1 333 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 ADAMTSL4-AS1Q5T5F5 129 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 SHEQ5VZ18 495 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 LYSMD4Q5XG99 296 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 BTN2A1Q7KYR7 527 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 TIGD4Q8IY51 512 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 SLC37A3Q8NCC5 494 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 OR5AP2Q8NGF4 316 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 OR1L3Q8NH93 324 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 OCC1Q8TAD7 63 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 HCAR2Q8TDS4 363 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 METTL21AQ8WXB1 218 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 RAD54LQ92698 747 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 ST6GALNAC6Q969X2 333 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 EXOC4Q96A65 974 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 C10orf90Q96M02 699 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 INTS14Q96SY0 518 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 CITED2Q99967 270 aaPredicted RBP4.35□□□□□ -1.71
PTCD3-211ENST00000476215 INPP5KQ9BT40 448 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 FUCA2Q9BTY2 467 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 THUMPD3Q9BV44 507 aaKnown RBP4.35□□□□□ -1.71
PTCD3-211ENST00000476215 ACTL8Q9H568 366 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 CACNG5Q9UF02 275 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 WDR37Q9Y2I8 494 aa4.35□□□□□ -1.71
PTCD3-211ENST00000476215 TRBV5-5A0A0J9YX44 114 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 SNURFLB1AK76 121 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 PRAF2O60831 178 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 GAS8-AS1O95177 125 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 PGLSO95336 258 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 RPN1P04843 607 aaKnown RBP4.34□□□□□ -1.71
PTCD3-211ENST00000476215 SLC2A2P11168 524 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-211ENST00000476215 CETN2P41208 172 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 CACNG1Q06432 222 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 SCN1BQ07699 218 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 TNK1Q13470 666 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 OPCMLQ14982 345 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 CCDC6Q16204 474 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 EXT1Q16394 746 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 SLC25A47Q6Q0C1 308 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 PTAR1Q7Z6K3 402 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-211ENST00000476215 HOGA1Q86XE5 327 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 DZIP1Q86YF9 867 aaKnown RBP4.34□□□□□ -1.71
PTCD3-211ENST00000476215 DCLK2Q8N568 766 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 CCDC63Q8NA47 563 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 OR10G8Q8NGN5 311 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 SEPT1Q8WYJ6 367 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 FAM162AQ96A26 154 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 NECTIN4Q96NY8 510 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 PIGQQ9BRB3 760 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 SDCBP2Q9H190 292 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 RIMS4Q9H426 269 aaPredicted RBP4.34□□□□□ -1.71
PTCD3-211ENST00000476215 SH3GLB2Q9NR46 395 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 PLCXD1Q9NUJ7 323 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 RNF186Q9NXI6 227 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 PKD2L2Q9NZM6 624 aa4.34□□□□□ -1.71
PTCD3-211ENST00000476215 MYH14Q7Z406 1995 aaKnown RBP4.34□□□□□ -1.71
PTCD3-211ENST00000476215 HEG1Q9ULI3 1381 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 IGSF1Q8N6C5 1336 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 A0A087X002 238 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 A0A1W2PRQ8 180 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 ZNF821O75541 412 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-211ENST00000476215 SEC24AO95486 1093 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 BAG3O95817 575 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 ATP1B1P05026 303 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 ZFYP08048 801 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-211ENST00000476215 GLULP15104 373 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 LBPP18428 481 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 TLX1P31314 330 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-211ENST00000476215 SFTPDP35247 375 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 GMPSP49915 693 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-211ENST00000476215 PTENP60484 403 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 PMP22Q01453 160 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 BFSP1Q12934 665 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 ZNF74Q16587 644 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 TAZQ16635 292 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 MRGPRG-AS1Q2M3A8 158 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 SGSM1Q2NKQ1 1148 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 CEP85LQ5SZL2 805 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 MPP7Q5T2T1 576 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 SUSD4Q5VX71 490 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 TMEM182Q6ZP80 229 aaPredicted RBP4.33□□□□□ -1.72
PTCD3-211ENST00000476215 KRT77Q7Z794 578 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 GLRX5Q86SX6 157 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 APCDD1Q8J025 514 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 WDSUB1Q8N9V3 476 aa4.33□□□□□ -1.72
PTCD3-211ENST00000476215 SMAP2Q8WU79 429 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms