RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 ABOP16442 354 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 ADRA1DP25100 572 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 AVPR1BP47901 424 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 PMP22Q01453 160 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 ACVR1Q04771 509 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 NDUFA9Q16795 377 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 PLAG1Q6DJT9 500 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 FBXO42Q6P3S6 717 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 PPP1R21Q6ZMI0 780 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 LRRC6Q86X45 466 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 VSTM4Q8IW00 320 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 AMER3Q8N944 861 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 CA5BP1Q8WTZ4 195 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 UTP23Q9BRU9 249 aaKnown RBP11.94□□□□□ -0.5
SKA3-206ENST00000475251 ENKD1Q9H0I2 346 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 MRPS30Q9NP92 439 aaKnown RBP11.94□□□□□ -0.5
SKA3-206ENST00000475251 COQ3Q9NZJ6 369 aa11.94□□□□□ -0.5
SKA3-206ENST00000475251 RUVBL1Q9Y265 456 aaKnown RBP11.94□□□□□ -0.5
SKA3-206ENST00000475251 DCHS2Q6V1P9 2916 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 ASPDHA6ND91 283 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 ZNF839A8K0R7 811 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 AKR1B15C9JRZ8 316 aaPredicted RBP11.93□□□□□ -0.5
SKA3-206ENST00000475251 CDK2AP1O14519 115 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 SUN1O94901 812 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 TSPAN12O95859 305 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 EZRP15311 586 aaKnown RBP11.93□□□□□ -0.5
SKA3-206ENST00000475251 RPA3P35244 121 aaPredicted RBP11.93□□□□□ -0.5
SKA3-206ENST00000475251 KIR3DL1P43629 444 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 BDKRB1P46663 353 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 KRTAP10-9P60411 292 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 SRSF11Q05519 484 aaKnown RBP11.93□□□□□ -0.5
SKA3-206ENST00000475251 FAM53BQ14153 422 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 MEP1AQ16819 746 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 BTBD16Q32M84 506 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 ACER2Q5QJU3 275 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 LRRC8BQ6P9F7 803 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 ZC3H7AQ8IWR0 971 aaKnown RBP11.93□□□□□ -0.5
SKA3-206ENST00000475251 KRT222Q8N1A0 295 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 BEST3Q8N1M1 668 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 GHDCQ8N2G8 530 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 OR52K1Q8NGK4 314 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 LKAAEAR1Q8TD35 194 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 MCOLN3Q8TDD5 553 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 SMPDL3AQ92484 453 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 PLCD4Q9BRC7 762 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 CATSPERZQ9NTU4 200 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 STOX2Q9P2F5 926 aaPredicted RBP11.93□□□□□ -0.5
SKA3-206ENST00000475251 PCDHA13Q9Y5I0 950 aa11.93□□□□□ -0.5
SKA3-206ENST00000475251 CCDC168Q8NDH2 2452 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 A0A1W2PPV9 198 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 FOXO6A8MYZ6 492 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 E7EVH7 732 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 NPIPA5E9PKD4 350 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 E9PLN8 166 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 H0YIG0 161 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 PRRG2O14669 202 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 FFAR3O14843 346 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 GPR42O15529 346 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 NRP2O60462 931 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 SEC24DO94855 1032 aaPredicted RBP11.92□□□□□ -0.5
SKA3-206ENST00000475251 HSD17B2P37059 387 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 AGTR2P50052 363 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 NAP1L1P55209 391 aaKnown RBP11.92□□□□□ -0.5
SKA3-206ENST00000475251 CSNK1G2P78368 415 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 RELAQ04206 551 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 TUBA3CQ13748 450 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 ARHGAP19Q14CB8 494 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 OR1C1Q15619 314 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 EXT1Q16394 746 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 HKDC1Q2TB90 917 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 ANKRD20A4Q4UJ75 823 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 MFSD4BQ5TF39 518 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 H3F3CQ6NXT2 135 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 TUBA3EQ6PEY2 450 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 MEX3BQ6ZN04 569 aaKnown RBP11.92□□□□□ -0.5
SKA3-206ENST00000475251 ZNF534Q76KX8 674 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 CPEB2Q7Z5Q1 589 aaKnown RBP11.92□□□□□ -0.5
SKA3-206ENST00000475251 CCDC170Q8IYT3 715 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 MPP5Q8N3R9 675 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 ACBD4Q8NC06 268 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 MDS2Q8NDY4 140 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 PPHLN1Q8NEY8 458 aaKnown RBP11.92□□□□□ -0.5
SKA3-206ENST00000475251 SCMH1Q96GD3 660 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 VKORC1Q9BQB6 163 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 ACAT2Q9BWD1 397 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 KCNK13Q9HB14 408 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 KLHL1Q9NR64 748 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 SLC2A6Q9UGQ3 507 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 NPIPA1Q9UND3 350 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 TCAF1Q9Y4C2 921 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 NFS1Q9Y697 457 aa11.92□□□□□ -0.5
SKA3-206ENST00000475251 A0A0A6YYC8 382 aaPredicted RBP11.91□□□□□ -0.5
SKA3-206ENST00000475251 I3L1I5 382 aaPredicted RBP11.91□□□□□ -0.5
SKA3-206ENST00000475251 PFDN6O15212 129 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 FOXS1O43638 330 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 ASNA1O43681 348 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 RPS3P23396 243 aaKnown RBP eCLIP11.91□□□□□ -0.5
SKA3-206ENST00000475251 ATP5DP30049 168 aa11.91□□□□□ -0.5
SKA3-206ENST00000475251 CYLC1P35663 651 aaPredicted RBP11.91□□□□□ -0.5
SKA3-206ENST00000475251 FDFT1P37268 417 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms