RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 UBE2R2Q712K3 238 aaPredicted RBP19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 ADCK2Q7Z695 626 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 PCGF5Q86SE9 256 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 KCNMB4Q86W47 210 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 DTWD1Q8N5C7 304 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 CD200R1Q8TD46 325 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 SSC4DQ8WTU2 575 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 C19orf60Q96EN9 201 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 OR2A5Q96R48 311 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 NAT9Q9BTE0 207 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 AARSD1Q9BTE6 412 aaKnown RBP19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 EPS8L2Q9H6S3 715 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 C14orf105Q9NVL8 296 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 TRMT6Q9UJA5 497 aaKnown RBP19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 RUVBL1Q9Y265 456 aaKnown RBP19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 PCDHGA10Q9Y5H3 936 aa19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 COPG1Q9Y678 874 aaKnown RBP19.39■□□□□ 0.69
PDLIM4-206ENST00000474421 ALOX12BO75342 701 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 HAUS5O94927 633 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 RGS4P49798 205 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 RNASEH2BQ5TBB1 312 aaKnown RBP19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 PARP9Q8IXQ6 854 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 CPNE9Q8IYJ1 553 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 AGGF1Q8N302 714 aaeCLIP19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 SLC35F6Q8N357 371 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 PPFIBP2Q8ND30 876 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 PCBD2Q9H0N5 130 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 ZBTB20Q9HC78 741 aaPredicted RBP19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 MKKSQ9NPJ1 570 aaPredicted RBP19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 AGPAT4Q9NRZ5 378 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 IARS2Q9NSE4 1012 aaKnown RBP19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 ASF1BQ9NVP2 202 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 STOX2Q9P2F5 926 aaPredicted RBP19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 TRPC4Q9UBN4 977 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 PCYOX1Q9UHG3 505 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 SNX12Q9UMY4 172 aa19.38■□□□□ 0.69
PDLIM4-206ENST00000474421 DDAH2O95865 285 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 CXCR2P25025 360 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 SLC26A3P40879 764 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 GLRBP48167 497 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 MPP1Q00013 466 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 MRPL49Q13405 166 aaKnown RBP19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 FAM53BQ14153 422 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 CRYMQ14894 314 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 NDUFA9Q16795 377 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 EIF2S3LQ2VIR3 472 aaKnown RBP19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 CRB2Q5IJ48 1285 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 ATG9BQ674R7 924 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 CUZD1Q86UP6 607 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 PALM2Q8IXS6 379 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 PRSS58Q8IYP2 241 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 C2CD4AQ8NCU7 369 aaPredicted RBP19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 MCOLN3Q8TDD5 553 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 MMABQ96EY8 250 aaPredicted RBP19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 THOC3Q96J01 351 aaKnown RBP19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 LMF1Q96S06 567 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 YIPF2Q9BWQ6 316 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 TGIF2Q9GZN2 237 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 DRC3Q9H069 523 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 CCDC177Q9NQR7 707 aaPredicted RBP19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 ABCF3Q9NUQ8 709 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 TAS2R13Q9NYV9 303 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 ASIC3Q9UHC3 531 aa19.37■□□□□ 0.69
PDLIM4-206ENST00000474421 CBX6O95503 412 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 C8GP07360 202 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 F7P08709 466 aaPredicted RBP19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 FDXRP22570 491 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 IMPA1P29218 277 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 EMP2P54851 167 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 ELOAQ14241 798 aaKnown RBP19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 NR6A1Q15406 480 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 HIF1AQ16665 826 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 HKDC1Q2TB90 917 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 VWA2Q5GFL6 755 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 SPANXN3Q5MJ09 141 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 ISLR2Q6UXK2 745 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 NDUFAF7Q7L592 441 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 PIWIL4Q7Z3Z4 852 aaKnown RBP19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 KBTBD2Q8IY47 623 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 LRRC56Q8IYG6 542 aaPredicted RBP19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 PRR7Q8TB68 274 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 DNAJB14Q8TBM8 379 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 SLCO2A1Q92959 643 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 CCDC138Q96M89 665 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 TMEM184CQ9NVA4 438 aa19.36■□□□□ 0.69
PDLIM4-206ENST00000474421 NSG1A0A0A6YYJ2 146 aa19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 IDSB3KWA1 339 aa19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 DNALI1O14645 258 aaPredicted RBP19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 SEMA7AO75326 666 aa19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 SP140Q13342 867 aa19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 B3GNTL1Q67FW5 361 aaPredicted RBP19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 KIAA0408Q6ZU52 694 aa19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 THAP11Q96EK4 314 aa19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 BARD1Q99728 777 aaKnown RBP19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 PARVBQ9HBI1 364 aa19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 ZNF160Q9HCG1 818 aa19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 NOVA2Q9UNW9 492 aaKnown RBP19.35■□□□□ 0.69
PDLIM4-206ENST00000474421 UTP20O75691 2785 aaKnown RBP19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 A0A1W2PQ72 361 aa19.34■□□□□ 0.69
PDLIM4-206ENST00000474421 ANKUB1A6NFN9 424 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms