RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 H0YGG7 62 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 HAT1O14929 419 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 H2AFYO75367 372 aaKnown RBP13.16□□□□□ -0.3
USF1-205ENST00000473969 SUPT3HO75486 399 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 IPO13O94829 963 aaKnown RBP13.16□□□□□ -0.3
USF1-205ENST00000473969 WDR47O94967 919 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 KLHL2O95198 593 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 CD63P08962 238 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 ATXN8OSP0DMR3 200 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 MYBL2P10244 700 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 CDH1P12830 882 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 ARF3P61204 181 aaPredicted RBP13.16□□□□□ -0.3
USF1-205ENST00000473969 DCDP81605 110 aaKnown RBP13.16□□□□□ -0.3
USF1-205ENST00000473969 SRSF6Q13247 344 aaKnown RBP13.16□□□□□ -0.3
USF1-205ENST00000473969 ACAP2Q15057 778 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 C1orf189Q5VU69 101 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 RHBDD2Q6NTF9 364 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 FAM199XQ6PEV8 388 aaPredicted RBP13.16□□□□□ -0.3
USF1-205ENST00000473969 TTLL10Q6ZVT0 673 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 CSNK1A1LQ8N752 337 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 CT55Q8WUE5 264 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 DCAKDQ8WVC6 231 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 SLC5A11Q8WWX8 675 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 RHBDF1Q96CC6 855 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 THAP11Q96EK4 314 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 CABS1Q96KC9 395 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 SCYL1Q96KG9 808 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 TXLNGYQ9BZA5 131 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 FAM117AQ9C073 453 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 CHST8Q9H2A9 424 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 PRORYQ9H606 182 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 STARD5Q9NSY2 213 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 CUTCQ9NTM9 273 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 NUDT4Q9NZJ9 180 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 IFT80Q9P2H3 777 aaPredicted RBP13.16□□□□□ -0.3
USF1-205ENST00000473969 DHCR7Q9UBM7 475 aaKnown RBP13.16□□□□□ -0.3
USF1-205ENST00000473969 SLC22A14Q9Y267 594 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 PCDHGA4Q9Y5G9 962 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 ANKRD11Q6UB99 2663 aaPredicted RBP13.16□□□□□ -0.3
USF1-205ENST00000473969 USP24Q9UPU5 2620 aa13.16□□□□□ -0.3
USF1-205ENST00000473969 SDK2Q58EX2 2172 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 AHCTF1Q8WYP5 2266 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 LOC105369274A0A096LPK9 316 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 LOC102723532A0A0G2JNH3 316 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 A0A1B0GX78 115 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 HYKKA2RU49 373 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 HMX2A2RU54 273 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 KERAO60938 352 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 STK16O75716 305 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 ALDOAP04075 364 aaKnown RBP13.15□□□□□ -0.3
USF1-205ENST00000473969 GNAZP19086 355 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 RORAP35398 523 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 GLRBP48167 497 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 CSNK1G2P78368 415 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 IRF9Q00978 393 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 OR4D1Q15615 310 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 NDUFA9Q16795 377 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 TSNAXIP1Q2TAA8 658 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 MUM1Q2TAK8 710 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 MLIPQ5VWP3 458 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 FRMPD2BQ6IN97 320 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 C16orf46Q6P387 395 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 ADGRD1Q6QNK2 874 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 ISCA2Q86U28 154 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 OR4N4Q8N0Y3 316 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 SNX31Q8N9S9 440 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 SLC38A9Q8NBW4 561 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 RHEBL1Q8TAI7 183 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 STARD8Q92502 1023 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 PTERQ96BW5 349 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 PPCSQ9HAB8 311 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 PRM3Q9NNZ6 103 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 IGSF5Q9NSI5 407 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 PSMC3IPQ9P2W1 217 aaPredicted RBP13.15□□□□□ -0.3
USF1-205ENST00000473969 FETUBQ9UGM5 382 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.15□□□□□ -0.3
USF1-205ENST00000473969 CDC14AQ9UNH5 594 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 PADI2Q9Y2J8 665 aa13.15□□□□□ -0.3
USF1-205ENST00000473969 V9GYY5 206 aaPredicted RBP13.15□□□□□ -0.3
USF1-205ENST00000473969 ADAMTS20P59510 1910 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 FITM1A5D6W6 292 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 H3BMH7 237 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 CLGNO14967 610 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 DSCR3O14972 297 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 PRPF4O43172 522 aaKnown RBP eCLIP13.14□□□□□ -0.31
USF1-205ENST00000473969 NRP2O60462 931 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 CCNT2O60583 730 aaKnown RBP13.14□□□□□ -0.31
USF1-205ENST00000473969 TUBBP07437 444 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 CTSBP07858 339 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 RBP1P09455 135 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 RAB40ALP0C0E4 278 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 COL6A2P12110 1019 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 GFAPP14136 432 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 CXCR2P25025 360 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 PTPN4P29074 926 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 HSPA7P48741 367 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 VSNL1P62760 191 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 RHDQ02161 417 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 DLG1Q12959 904 aa13.14□□□□□ -0.31
USF1-205ENST00000473969 GARNL3Q5VVW2 1013 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms