RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 PTCHD3Q3KNS1 767 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 LRRC66Q68CR7 880 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 METTL2BQ6P1Q9 378 aaKnown RBP20.46■□□□□ 0.87
COL18A1-207ENST00000473212 ZZZ3Q8IYH5 903 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 ELMOD1Q8N336 334 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 MYLIPQ8WY64 445 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 PANX1Q96RD7 426 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 BBS2Q9BXC9 721 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 CCNB1IP1Q9NPC3 277 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 ZNF229Q9UJW7 825 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 OSGIN1Q9UJX0 560 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 FPGTO14772 594 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 SEMG1P04279 462 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 CD70P32970 193 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 SPAM1P38567 509 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 KIR3DL1P43629 444 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 ADNP2Q6IQ32 1131 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 CRTC1Q6UUV9 634 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 UBE2R2Q712K3 238 aaPredicted RBP20.46■□□□□ 0.87
COL18A1-207ENST00000473212 CLECL1Q8IZS7 167 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 CRIPAKQ8N1N5 446 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 RHOXF1Q8NHV9 184 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 MCFD2Q8NI22 146 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 NELL1Q92832 810 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 REXO4Q9GZR2 422 aaKnown RBP20.46■□□□□ 0.87
COL18A1-207ENST00000473212 SNX6Q9UNH7 406 aa20.46■□□□□ 0.87
COL18A1-207ENST00000473212 MICAL3Q7RTP6 2002 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 LHCGRP22888 699 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 PLEKHG6Q3KR16 790 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 ZNF621Q6ZSS3 439 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 DNAJB7Q7Z6W7 309 aaPredicted RBP20.45■□□□□ 0.86
COL18A1-207ENST00000473212 DCAF4L2Q8NA75 395 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 CMTM7Q96FZ5 175 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 HTATIP2Q9BUP3 242 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 ELAC1Q9H777 363 aaKnown RBP20.45■□□□□ 0.86
COL18A1-207ENST00000473212 ZBTB20Q9HC78 741 aaPredicted RBP20.45■□□□□ 0.86
COL18A1-207ENST00000473212 THUMPD1Q9NXG2 353 aaKnown RBP20.45■□□□□ 0.86
COL18A1-207ENST00000473212 SLCO3A1Q9UIG8 710 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 RPS6KA6Q9UK32 745 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 KCNE1BA0A087WTH5 132 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 ARHGEF15O94989 841 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 PPP5CP53041 499 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 NPRL3Q12980 569 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 SLC13A2Q13183 592 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 BOP1Q14137 746 aaKnown RBP20.45■□□□□ 0.86
COL18A1-207ENST00000473212 PROX2Q3B8N5 592 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 PDE12Q6L8Q7 609 aaKnown RBP20.45■□□□□ 0.86
COL18A1-207ENST00000473212 TMEM53Q6P2H8 277 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 APH1BQ8WW43 257 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 DCSTAMPQ9H295 470 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 ABCB10Q9NRK6 738 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 TMPRSS11EQ9UL52 423 aa20.45■□□□□ 0.86
COL18A1-207ENST00000473212 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP20.45■□□□□ 0.861e-13■■□□□ 13.4
COL18A1-207ENST00000473212 PLXNB3Q9ULL4 1909 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 C5orf42Q9H799 3197 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 MYO1DO94832 1006 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 ALDH7A1P49419 539 aaKnown RBP20.44■□□□□ 0.86
COL18A1-207ENST00000473212 LMAN2Q12907 356 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 DUOXA1Q1HG43 343 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 Q6ZPB1 254 aaPredicted RBP20.44■□□□□ 0.86
COL18A1-207ENST00000473212 PTOV1Q86YD1 416 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 ENTHD1Q8IYW4 607 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 HJURPQ8NCD3 748 aaPredicted RBP20.44■□□□□ 0.86
COL18A1-207ENST00000473212 ZNF461Q8TAF7 563 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 DNASE1L2Q92874 299 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 P2RY13Q9BPV8 354 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 REEP1Q9H902 201 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 BTBD3Q9Y2F9 522 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 NUDT7P0C024 238 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 MAPK1P28482 360 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 LIPAP38571 399 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 CLK1P49759 484 aaKnown RBP20.44■□□□□ 0.86
COL18A1-207ENST00000473212 CASP9P55211 416 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 CYP4F8P98187 520 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 DDX39BQ13838 428 aaKnown RBP20.44■□□□□ 0.86
COL18A1-207ENST00000473212 NOXRED1Q6NXP6 359 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 OVCA2Q8WZ82 227 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 TPD52L3Q96J77 140 aa20.44■□□□□ 0.86
COL18A1-207ENST00000473212 CLDN24A6NM45 220 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 CPSF4O95639 269 aaKnown RBP20.43■□□□□ 0.86
COL18A1-207ENST00000473212 AMD1P17707 334 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 EIF2DP41214 584 aaKnown RBP20.43■□□□□ 0.86
COL18A1-207ENST00000473212 FADDQ13158 208 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 PRSS36Q5K4E3 855 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 ZNF648Q5T619 568 aaPredicted RBP20.43■□□□□ 0.86
COL18A1-207ENST00000473212 LYPLAL1Q5VWZ2 237 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 FAM9CQ8IZT9 166 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 IPCEF1Q8WWN9 437 aaPredicted RBP20.43■□□□□ 0.86
COL18A1-207ENST00000473212 KCTD5Q9NXV2 234 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 ANKMY1Q9P2S6 941 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 ZNF451Q9Y4E5 1061 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 EPN2O95208 641 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 MYCP01106 439 aaPredicted RBP20.43■□□□□ 0.86
COL18A1-207ENST00000473212 GJA1P17302 382 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 AQP1P29972 269 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 PTSQ03393 145 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 CAMK2GQ13555 558 aaPredicted RBP20.43■□□□□ 0.86
COL18A1-207ENST00000473212 LIN28BQ6ZN17 250 aaKnown RBP eCLIP20.43■□□□□ 0.86
COL18A1-207ENST00000473212 CBLL1Q75N03 491 aa20.43■□□□□ 0.86
COL18A1-207ENST00000473212 EIF3MQ7L2H7 374 aaKnown RBP20.43■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms