RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 ZNF700Q9H0M5 742 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 STMN3Q9NZ72 180 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 COQ3Q9NZJ6 369 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 EFR3BQ9Y2G0 817 aa8.84□□□□□ -0.99
VCL-204ENST00000472585 ZNF469Q96JG9 3925 aaPredicted RBP8.84□□□□□ -0.99
VCL-204ENST00000472585 CPAMD8Q8IZJ3 1885 aa8.83□□□□□ -1
VCL-204ENST00000472585 NSD1Q96L73 2696 aaPredicted RBP8.83□□□□□ -1
VCL-204ENST00000472585 MACROD2A1Z1Q3 448 aa8.83□□□□□ -1
VCL-204ENST00000472585 FAM227AF5H4B4 570 aa8.83□□□□□ -1
VCL-204ENST00000472585 QSOX1O00391 747 aa8.83□□□□□ -1
VCL-204ENST00000472585 PRAMEF2O60811 474 aa8.83□□□□□ -1
VCL-204ENST00000472585 WFS1O76024 890 aa8.83□□□□□ -1
VCL-204ENST00000472585 FOSL1P15407 271 aa8.83□□□□□ -1
VCL-204ENST00000472585 FDXRP22570 491 aa8.83□□□□□ -1
VCL-204ENST00000472585 PTPN7P35236 360 aa8.83□□□□□ -1
VCL-204ENST00000472585 MAT1AQ00266 395 aaKnown RBP8.83□□□□□ -1
VCL-204ENST00000472585 OCA2Q04671 838 aa8.83□□□□□ -1
VCL-204ENST00000472585 ACVR1Q04771 509 aa8.83□□□□□ -1
VCL-204ENST00000472585 TBX2Q13207 712 aaPredicted RBP8.83□□□□□ -1
VCL-204ENST00000472585 SYTL3Q4VX76 610 aa8.83□□□□□ -1
VCL-204ENST00000472585 KRTCAP3Q53RY4 240 aa8.83□□□□□ -1
VCL-204ENST00000472585 RNFT1Q5M7Z0 435 aa8.83□□□□□ -1
VCL-204ENST00000472585 CCDC181Q5TID7 509 aa8.83□□□□□ -1
VCL-204ENST00000472585 CES4AQ5XG92 561 aa8.83□□□□□ -1
VCL-204ENST00000472585 FCRLBQ6BAA4 426 aa8.83□□□□□ -1
VCL-204ENST00000472585 C11orf63Q6NUN7 778 aa8.83□□□□□ -1
VCL-204ENST00000472585 PRMT9Q6P2P2 845 aa8.83□□□□□ -1
VCL-204ENST00000472585 LRRC8BQ6P9F7 803 aa8.83□□□□□ -1
VCL-204ENST00000472585 UNC5DQ6UXZ4 953 aa8.83□□□□□ -1
VCL-204ENST00000472585 Q6ZPB1 254 aaPredicted RBP8.83□□□□□ -1
VCL-204ENST00000472585 FGD2Q7Z6J4 655 aa8.83□□□□□ -1
VCL-204ENST00000472585 PRUNE1Q86TP1 453 aa8.83□□□□□ -1
VCL-204ENST00000472585 SPPL2CQ8IUH8 684 aa8.83□□□□□ -1
VCL-204ENST00000472585 ZC3H7AQ8IWR0 971 aaKnown RBP8.83□□□□□ -1
VCL-204ENST00000472585 HMGCLL1Q8TB92 370 aa8.83□□□□□ -1
VCL-204ENST00000472585 SLC22A18Q96BI1 424 aa8.83□□□□□ -1
VCL-204ENST00000472585 SDCCAG3Q96C92 435 aa8.83□□□□□ -1
VCL-204ENST00000472585 SIGLEC12Q96PQ1 595 aa8.83□□□□□ -1
VCL-204ENST00000472585 TREX2Q9BQ50 279 aaPredicted RBP8.83□□□□□ -1
VCL-204ENST00000472585 RNF32Q9H0A6 362 aa8.83□□□□□ -1
VCL-204ENST00000472585 TSPAN10Q9H1Z9 355 aaPredicted RBP8.83□□□□□ -1
VCL-204ENST00000472585 LRRC40Q9H9A6 602 aa8.83□□□□□ -1
VCL-204ENST00000472585 ZNHIT6Q9NWK9 470 aaKnown RBP8.83□□□□□ -1
VCL-204ENST00000472585 GALPQ9UBC7 116 aa8.83□□□□□ -1
VCL-204ENST00000472585 TRPC4Q9UBN4 977 aa8.83□□□□□ -1
VCL-204ENST00000472585 SLC39A10Q9ULF5 831 aa8.83□□□□□ -1
VCL-204ENST00000472585 RUVBL1Q9Y265 456 aaKnown RBP8.83□□□□□ -1
VCL-204ENST00000472585 PCDHA13Q9Y5I0 950 aa8.83□□□□□ -1
VCL-204ENST00000472585 HRH3Q9Y5N1 445 aa8.83□□□□□ -1
VCL-204ENST00000472585 HCFC1P51610 2035 aa8.83□□□□□ -1
VCL-204ENST00000472585 OR5H15A6NDH6 313 aa8.82□□□□□ -1
VCL-204ENST00000472585 GOLGA6L19H0YKK7 550 aa8.82□□□□□ -1
VCL-204ENST00000472585 P2RX6O15547 441 aa8.82□□□□□ -1
VCL-204ENST00000472585 ABOP16442 354 aa8.82□□□□□ -1
VCL-204ENST00000472585 FBLP22087 321 aaKnown RBP8.82□□□□□ -1
VCL-204ENST00000472585 TPM4P67936 248 aa8.82□□□□□ -1
VCL-204ENST00000472585 HSF1Q00613 529 aa8.82□□□□□ -1
VCL-204ENST00000472585 FOLH1Q04609 750 aa8.82□□□□□ -1
VCL-204ENST00000472585 LTBQ06643 244 aa8.82□□□□□ -1
VCL-204ENST00000472585 TSTD2Q5T7W7 516 aa8.82□□□□□ -1
VCL-204ENST00000472585 SPINK14Q6IE38 97 aa8.82□□□□□ -1
VCL-204ENST00000472585 H3F3CQ6NXT2 135 aa8.82□□□□□ -1
VCL-204ENST00000472585 CNSTQ6PJW8 725 aa8.82□□□□□ -1
VCL-204ENST00000472585 SUSD1Q6UWL2 747 aa8.82□□□□□ -1
VCL-204ENST00000472585 RIPOR1Q6ZS17 1223 aa8.82□□□□□ -1
VCL-204ENST00000472585 LANCL3Q6ZV70 420 aa8.82□□□□□ -1
VCL-204ENST00000472585 NEK10Q6ZWH5 1172 aa8.82□□□□□ -1
VCL-204ENST00000472585 SIAH3Q8IW03 269 aa8.82□□□□□ -1
VCL-204ENST00000472585 DNAAF3Q8N9W5 541 aa8.82□□□□□ -1
VCL-204ENST00000472585 MDS2Q8NDY4 140 aa8.82□□□□□ -1
VCL-204ENST00000472585 OR4L1Q8NH43 312 aa8.82□□□□□ -1
VCL-204ENST00000472585 SLC35B2Q8TB61 432 aa8.82□□□□□ -1
VCL-204ENST00000472585 ASZ1Q8WWH4 475 aa8.82□□□□□ -1
VCL-204ENST00000472585 OR2A5Q96R48 311 aa8.82□□□□□ -1
VCL-204ENST00000472585 DPH7Q9BTV6 452 aa8.82□□□□□ -1
VCL-204ENST00000472585 ACAT2Q9BWD1 397 aa8.82□□□□□ -1
VCL-204ENST00000472585 TGIF2Q9GZN2 237 aa8.82□□□□□ -1
VCL-204ENST00000472585 P2RY12Q9H244 342 aa8.82□□□□□ -1
VCL-204ENST00000472585 CXXC4Q9H2H0 198 aa8.82□□□□□ -1
VCL-204ENST00000472585 CCM2LQ9NUG4 571 aaPredicted RBP8.82□□□□□ -1
VCL-204ENST00000472585 INTS7Q9NVH2 962 aaKnown RBP8.82□□□□□ -1
VCL-204ENST00000472585 TNFRSF10DQ9UBN6 386 aa8.82□□□□□ -1
VCL-204ENST00000472585 TTC7AQ9ULT0 858 aaPredicted RBP8.82□□□□□ -1
VCL-204ENST00000472585 CSPG4Q6UVK1 2322 aa8.82□□□□□ -1
VCL-204ENST00000472585 A0A0A6YYC8 382 aaPredicted RBP8.81□□□□□ -1
VCL-204ENST00000472585 A8MUI8 341 aa8.81□□□□□ -1
VCL-204ENST00000472585 I3L1I5 382 aaPredicted RBP8.81□□□□□ -1
VCL-204ENST00000472585 STK10O94804 968 aaKnown RBP8.81□□□□□ -1
VCL-204ENST00000472585 ZWINTO95229 277 aa8.81□□□□□ -1
VCL-204ENST00000472585 STATHP02808 62 aa8.81□□□□□ -1
VCL-204ENST00000472585 HEXBP07686 556 aa8.81□□□□□ -1
VCL-204ENST00000472585 ETS1P14921 441 aa8.81□□□□□ -1
VCL-204ENST00000472585 CXCR2P25025 360 aa8.81□□□□□ -1
VCL-204ENST00000472585 CTNNA2P26232 953 aa8.81□□□□□ -1
VCL-204ENST00000472585 CD96P40200 585 aa8.81□□□□□ -1
VCL-204ENST00000472585 AP2B1P63010 937 aa8.81□□□□□ -1
VCL-204ENST00000472585 ALDH6A1Q02252 535 aaKnown RBP8.81□□□□□ -1
VCL-204ENST00000472585 ZNF33BQ06732 778 aa8.81□□□□□ -1
VCL-204ENST00000472585 FOXD4Q12950 439 aaPredicted RBP8.81□□□□□ -1
VCL-204ENST00000472585 KLF1Q13351 362 aaPredicted RBP8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms