RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 CCR8P51685 355 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 E2F2Q14209 437 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 SLBPQ14493 270 aaKnown RBP eCLIP18.45■□□□□ 0.54
PSPC1-203ENST00000471658 ZIC1Q15915 447 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 SNAP47Q5SQN1 464 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 ADNP2Q6IQ32 1131 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 CGB2Q6NT52 195 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 FIGLAQ6QHK4 219 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 SCIMPQ6UWF3 145 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 ZNF574Q6ZN55 896 aaPredicted RBP18.45■□□□□ 0.54
PSPC1-203ENST00000471658 PIP4P1Q86T03 277 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 CRLF3Q8IUI8 442 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 OR4K1Q8NGD4 311 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 METTL6Q8TCB7 284 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 MTFMTQ96DP5 389 aaKnown RBP18.45■□□□□ 0.54
PSPC1-203ENST00000471658 WDR34Q96EX3 536 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 PTCD3Q96EY7 689 aaKnown RBP18.45■□□□□ 0.54
PSPC1-203ENST00000471658 CHMP6Q96FZ7 201 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 RAB33BQ9H082 229 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 ZMYND15Q9H091 742 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 EPB41L1Q9H4G0 881 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 PELI2Q9HAT8 420 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 TRPS1Q9UHF7 1281 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 HAO1Q9UJM8 370 aa18.45■□□□□ 0.54
PSPC1-203ENST00000471658 ZNF490Q9ULM2 529 aaPredicted RBP18.45■□□□□ 0.54
PSPC1-203ENST00000471658 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.45■□□□□ 0.54
PSPC1-203ENST00000471658 SNRNP200O75643 2136 aaKnown RBP18.44■□□□□ 0.54
PSPC1-203ENST00000471658 COL5A1P20908 1838 aaPredicted RBP18.44■□□□□ 0.54
PSPC1-203ENST00000471658 SLC9B1P1A6NJY1 282 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 MATN2O00339 956 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 GIPC1O14908 333 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 HAT1O14929 419 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 LCMT2O60294 686 aaKnown RBP18.44■□□□□ 0.54
PSPC1-203ENST00000471658 FGF4P08620 206 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 JUPP14923 745 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 ACADVLP49748 655 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 RPL14P50914 215 aaKnown RBP18.44■□□□□ 0.54
PSPC1-203ENST00000471658 ZRSR2Q15696 482 aaKnown RBP18.44■□□□□ 0.54
PSPC1-203ENST00000471658 TBCCQ15814 346 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 CCDC157Q569K6 752 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 LIPJQ5W064 366 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 ZNF425Q6IV72 752 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 PAQR7Q86WK9 346 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 KIAA2013Q8IYS2 634 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 CLYBLQ8N0X4 340 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 RNF175Q8N4F7 328 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 GRAMD1AQ96CP6 724 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 TRAPPC9Q96Q05 1148 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 PLCD4Q9BRC7 762 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 SYNPO2LQ9H987 977 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 FARSBQ9NSD9 589 aaKnown RBP18.44■□□□□ 0.54
PSPC1-203ENST00000471658 TMEM184CQ9NVA4 438 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 STK38LQ9Y2H1 464 aa18.44■□□□□ 0.54
PSPC1-203ENST00000471658 SPEGQ15772 3267 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 IGHV5-51A0A0C4DH38 117 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 GMNCA6NCL1 334 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 TNFSF14O43557 240 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 CRCPO75575 148 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 SQSTM1Q13501 440 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 UGT3A2Q3SY77 523 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 GRHL2Q6ISB3 625 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 ZDHHC12Q96GR4 267 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 FCRL4Q96PJ5 515 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 SEMA6CQ9H3T2 930 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 EHD1Q9H4M9 534 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 SNX7Q9UNH6 387 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 PTGDR2Q9Y5Y4 395 aa18.43■□□□□ 0.54
PSPC1-203ENST00000471658 A8MU76 341 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 UGDHO60701 494 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 SHOX2O60902 331 aaPredicted RBP18.42■□□□□ 0.54
PSPC1-203ENST00000471658 C9P02748 559 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 JUNP05412 331 aaKnown RBP18.42■□□□□ 0.54
PSPC1-203ENST00000471658 NEK2P51955 445 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 REEP5Q00765 189 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 RBBP5Q15291 538 aaKnown RBP18.42■□□□□ 0.54
PSPC1-203ENST00000471658 GGTA1PQ4G0N0 100 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 SGO1Q5FBB7 561 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 KANK2Q63ZY3 851 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 FBXO42Q6P3S6 717 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 WDR74Q6RFH5 385 aaPredicted RBP18.42■□□□□ 0.54
PSPC1-203ENST00000471658 PLXDC1Q8IUK5 500 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 DEFB124Q8NES8 71 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 HBEGFQ99075 208 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 CDC6Q99741 560 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 EFCAB11Q9BUY7 163 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 FAM107BQ9H098 131 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 TUBB1Q9H4B7 451 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 FAM60AQ9NP50 221 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 C1GALT1Q9NS00 363 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 BTRCQ9Y297 605 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 DNAJC15Q9Y5T4 150 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 RIF1Q5UIP0 2472 aaKnown RBP18.42■□□□□ 0.54
PSPC1-203ENST00000471658 UNC13CQ8NB66 2214 aa18.42■□□□□ 0.54
PSPC1-203ENST00000471658 OR2A25A4D2G3 310 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 ZW10O43264 779 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 GFRA3O60609 400 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 CTSVO60911 334 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 SKAP2O75563 359 aaPredicted RBP18.41■□□□□ 0.54
PSPC1-203ENST00000471658 RASSF9O75901 435 aa18.41■□□□□ 0.54
PSPC1-203ENST00000471658 CPNE6O95741 557 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms