RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 SRSF6Q13247 344 aaKnown RBP14.63□□□□□ -0.07
SDC3-203ENST00000471567 ACAP2Q15057 778 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 FAM214AQ32MH5 1076 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 WASHC2DQ5SRD0 308 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 FRMPD2BQ6IN97 320 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 KLC3Q6P597 504 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 TIFABQ6ZNK6 161 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 ADCK2Q7Z695 626 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 THOC6Q86W42 341 aaKnown RBP14.63□□□□□ -0.07
SDC3-203ENST00000471567 ZNF655Q8N720 491 aaPredicted RBP14.63□□□□□ -0.07
SDC3-203ENST00000471567 TTC29Q8NA56 475 aaPredicted RBP14.63□□□□□ -0.07
SDC3-203ENST00000471567 PDPRQ8NCN5 879 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 ABHD11Q8NFV4 315 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 MR1Q95460 341 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 THAP11Q96EK4 314 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 RNF31Q96EP0 1072 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 SLC45A3Q96JT2 553 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 OR2A5Q96R48 311 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 OR4K3Q96R72 315 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 GPR87Q9BY21 358 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 VPS11Q9H270 941 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 ALG9Q9H6U8 611 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 CNOT10Q9H9A5 744 aaKnown RBP14.63□□□□□ -0.07
SDC3-203ENST00000471567 PPCSQ9HAB8 311 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 CPNE5Q9HCH3 593 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 CD274Q9NZQ7 290 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 CROTQ9UKG9 612 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 PCDHGA6Q9Y5G7 932 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 KCNE2Q9Y6J6 123 aa14.63□□□□□ -0.07
SDC3-203ENST00000471567 KCNE1BA0A087WTH5 132 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 LOC105369274A0A096LPK9 316 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 LOC102723532A0A0G2JNH3 316 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 IQANK1A0A1B0GTG1 560 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 SYCE1LA8MT33 242 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 H0YGG7 62 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 TXNDC9O14530 226 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 HAT1O14929 419 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 SEC16AO15027 2179 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 S100BP04271 92 aaPredicted RBP14.62□□□□□ -0.07
SDC3-203ENST00000471567 CDH1P12830 882 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 TCN2P20062 427 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 AGXTP21549 392 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 GRK3P35626 688 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 DLSTP36957 453 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 GMPRP36959 345 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 SLC6A12P48065 614 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 KCNC1P48547 511 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 CCR8P51685 355 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 ARF3P61204 181 aaPredicted RBP14.62□□□□□ -0.07
SDC3-203ENST00000471567 RPS15AP62244 130 aaKnown RBP14.62□□□□□ -0.07
SDC3-203ENST00000471567 IRF9Q00978 393 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 ZNF385CQ66K41 422 aaPredicted RBP14.62□□□□□ -0.07
SDC3-203ENST00000471567 GPR155Q7Z3F1 870 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 OR4N4Q8N0Y3 316 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 OR4K1Q8NGD4 311 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 CT55Q8WUE5 264 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 UBLCP1Q8WVY7 318 aaPredicted RBP14.62□□□□□ -0.07
SDC3-203ENST00000471567 SLC5A11Q8WWX8 675 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 RERGQ96A58 199 aaPredicted RBP14.62□□□□□ -0.07
SDC3-203ENST00000471567 CABS1Q96KC9 395 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 GPR78Q96P69 363 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 ATOH8Q96SQ7 321 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 C17orf62Q9BQA9 187 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 SARGQ9BW04 601 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 CAPS2Q9BXY5 557 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 AKIRIN1Q9H9L7 192 aaPredicted RBP14.62□□□□□ -0.07
SDC3-203ENST00000471567 TXLNGQ9NUQ3 528 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 NUDT4Q9NZJ9 180 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 PTBP2Q9UKA9 531 aaKnown RBP14.62□□□□□ -0.07
SDC3-203ENST00000471567 SH2B3Q9UQQ2 575 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 SLC22A14Q9Y267 594 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 DYRK1BQ9Y463 629 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 PCDHGA4Q9Y5G9 962 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 ZZEF1O43149 2961 aa14.62□□□□□ -0.07
SDC3-203ENST00000471567 NCF1BA6NI72 391 aaPredicted RBP14.61□□□□□ -0.07
SDC3-203ENST00000471567 ZNF891A8MT65 544 aaPredicted RBP14.61□□□□□ -0.07
SDC3-203ENST00000471567 NCF1CA8MVU1 366 aaPredicted RBP14.61□□□□□ -0.07
SDC3-203ENST00000471567 TAPBPO15533 448 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 RECKO95980 971 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 TUBBP07437 444 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 RAB40ALP0C0E4 278 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 NCF1P14598 390 aaPredicted RBP14.61□□□□□ -0.07
SDC3-203ENST00000471567 WT1P19544 449 aaPredicted RBP14.61□□□□□ -0.07
SDC3-203ENST00000471567 DCDP81605 110 aaKnown RBP14.61□□□□□ -0.07
SDC3-203ENST00000471567 MC1RQ01726 317 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 DNASE1L3Q13609 305 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 ERCC6LQ2NKX8 1250 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 TSNAXIP1Q2TAA8 658 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 PRTGQ2VWP7 1150 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 CRTC2Q53ET0 693 aaPredicted RBP14.61□□□□□ -0.07
SDC3-203ENST00000471567 ARHGAP40Q5TG30 622 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 EMBQ6PCB8 327 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 FAM199XQ6PEV8 388 aaPredicted RBP14.61□□□□□ -0.07
SDC3-203ENST00000471567 NEIL2Q969S2 332 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 GBP5Q96PP8 586 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 CHST8Q9H2A9 424 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 PELI2Q9HAT8 420 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 CUTCQ9NTM9 273 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 WWOXQ9NZC7 414 aa14.61□□□□□ -0.07
SDC3-203ENST00000471567 PSMC3IPQ9P2W1 217 aaPredicted RBP14.61□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms