RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 SCN3AQ9NY46 2000 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 SUPT3HB4E1H0 165 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 UBXN8O00124 270 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 TAPBPO15533 448 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 SUPT3HO75486 399 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 WDR47O94967 919 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 S100BP04271 92 aaPredicted RBP18.9■□□□□ 0.62
HDAC7-220ENST00000471235 HRH2P25021 359 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 UCNP55089 124 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 TMPRSS3P57727 454 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 CSNK1G2P78368 415 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 RELAQ04206 551 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 COL9A2Q14055 689 aaPredicted RBP18.9■□□□□ 0.62
HDAC7-220ENST00000471235 NAA30Q147X3 362 aaPredicted RBP18.9■□□□□ 0.62
HDAC7-220ENST00000471235 COL28A1Q2UY09 1125 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 TECRLQ5HYJ1 363 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 TCTE1Q5JU00 501 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 LGSNQ5TDP6 509 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 SULT1C3Q6IMI6 304 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 PLD3Q8IV08 490 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 DSELQ8IZU8 1212 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 RHEBL1Q8TAI7 183 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 CT55Q8WUE5 264 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 CAVIN3Q969G5 261 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 NEIL2Q969S2 332 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 MTBPQ96DY7 904 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 TSNARE1Q96NA8 513 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 CCDC77Q9BR77 488 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 SLC7A5P2Q9GIP4 190 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 AKIRIN1Q9H9L7 192 aaPredicted RBP18.9■□□□□ 0.62
HDAC7-220ENST00000471235 CPNE5Q9HCH3 593 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 LHX9Q9NQ69 397 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 STARD5Q9NSY2 213 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 ZNF358Q9NW07 568 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 CROTQ9UKG9 612 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 SRPK3Q9UPE1 567 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 SLC22A14Q9Y267 594 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 CACNA1BQ00975 2339 aa18.9■□□□□ 0.62
HDAC7-220ENST00000471235 IQANK1A0A1B0GTG1 560 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 CCDC189A1A4V9 331 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 H0YGG7 62 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 TERTO14746 1132 aaKnown RBP18.89■□□□□ 0.61
HDAC7-220ENST00000471235 EFSO43281 561 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 RFPL1O75677 317 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 HBQ1P09105 142 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 CCNYL3P0C7X3 344 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 GDF5P43026 501 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 HSPA7P48741 367 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 ARF3P61204 181 aaPredicted RBP18.89■□□□□ 0.61
HDAC7-220ENST00000471235 ACAP2Q15057 778 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 FBXO48Q5FWF7 155 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 ZNF385CQ66K41 422 aaPredicted RBP18.89■□□□□ 0.61
HDAC7-220ENST00000471235 RHBDD2Q6NTF9 364 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 KLC3Q6P597 504 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 TIFABQ6ZNK6 161 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 ABHD11Q8NFV4 315 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 MZB1Q8WU39 189 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 SLC5A11Q8WWX8 675 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 KIAA1143Q96AT1 154 aaPredicted RBP18.89■□□□□ 0.61
HDAC7-220ENST00000471235 OR2A5Q96R48 311 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 GPN2Q9H9Y4 310 aaPredicted RBP18.89■□□□□ 0.61
HDAC7-220ENST00000471235 DHCR7Q9UBM7 475 aaKnown RBP18.89■□□□□ 0.61
HDAC7-220ENST00000471235 PTBP2Q9UKA9 531 aaKnown RBP18.89■□□□□ 0.61
HDAC7-220ENST00000471235 RAB21Q9UL25 225 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 PADI1Q9ULC6 663 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 DYRK1BQ9Y463 629 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 CFAP47Q6ZTR5 3102 aa18.89■□□□□ 0.61
HDAC7-220ENST00000471235 DSPP15924 2871 aaKnown RBP18.88■□□□□ 0.61
HDAC7-220ENST00000471235 FITM1A5D6W6 292 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 MEN1O00255 615 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 SRPX2O60687 465 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-220ENST00000471235 IPO13O94829 963 aaKnown RBP18.88■□□□□ 0.61
HDAC7-220ENST00000471235 MTHFD2P13995 350 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 GGT5P36269 586 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 DLSTP36957 453 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 GRM7Q14831 915 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 PRTGQ2VWP7 1150 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 WASHC2DQ5SRD0 308 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 CATSPEREQ5SY80 951 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 LCN10Q6JVE6 187 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 FAM199XQ6PEV8 388 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-220ENST00000471235 ZNF517Q6ZMY9 492 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-220ENST00000471235 CCDC81Q6ZN84 652 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 TTC29Q8NA56 475 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-220ENST00000471235 EPS8L3Q8TE67 593 aaKnown RBP18.88■□□□□ 0.61
HDAC7-220ENST00000471235 UBTD2Q8WUN7 234 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 MR1Q95460 341 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 ESAMQ96AP7 390 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 NDC1Q9BTX1 674 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 SPNS1Q9H2V7 528 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 CNOT10Q9H9A5 744 aaKnown RBP18.88■□□□□ 0.61
HDAC7-220ENST00000471235 PPCSQ9HAB8 311 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 TBK1Q9UHD2 729 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 ASB1Q9Y576 335 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 PCDHGA4Q9Y5G9 962 aa18.88■□□□□ 0.61
HDAC7-220ENST00000471235 LAMA5O15230 3695 aa18.87■□□□□ 0.61
HDAC7-220ENST00000471235 SMIM23A6NLE4 172 aa18.87■□□□□ 0.61
HDAC7-220ENST00000471235 SYCE1LA8MT33 242 aa18.87■□□□□ 0.61
HDAC7-220ENST00000471235 P2RX6O15547 441 aa18.87■□□□□ 0.61
HDAC7-220ENST00000471235 MED26O95402 600 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms