RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 PVRP15151 417 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 CD9P21926 228 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 OTX2P32243 289 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 GABRA4P48169 554 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 SERPINB8P50452 374 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 SLC12A2P55011 1212 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 RPA4Q13156 261 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 RAPSNQ13702 412 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 BMPR2Q13873 1038 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 BOP1Q14137 746 aaKnown RBP8.72□□□□□ -1.01
SF3A1-206ENST00000471037 PTRHD1Q6GMV3 140 aaKnown RBP8.72□□□□□ -1.01
SF3A1-206ENST00000471037 SPESP1Q6UW49 350 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 Q6ZS92 163 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 CCDC91Q7Z6B0 441 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 TRABD2AQ86V40 505 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 AMIGO1Q86WK6 493 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 GPR135Q8IZ08 494 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 ADGRF3Q8IZF5 1079 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 GALNT16Q8N428 558 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 CISD2Q8N5K1 135 aaKnown RBP8.72□□□□□ -1.01
SF3A1-206ENST00000471037 GPATCH11Q8N954 259 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 OR2Y1Q8NGV0 311 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 PROKR1Q8TCW9 393 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 ACMSDQ8TDX5 336 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 MZB1Q8WU39 189 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 TM9SF4Q92544 642 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 INPP5DQ92835 1189 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 ATP6V1G3Q96LB4 118 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 BIRC8Q96P09 236 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 GBP5Q96PP8 586 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 AARSD1Q9BTE6 412 aaKnown RBP8.72□□□□□ -1.01
SF3A1-206ENST00000471037 SLC7A5P2Q9GIP4 190 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 P2RY12Q9H244 342 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 ZNF552Q9H707 407 aaPredicted RBP8.72□□□□□ -1.01
SF3A1-206ENST00000471037 MTO1Q9Y2Z2 717 aaKnown RBP8.72□□□□□ -1.01
SF3A1-206ENST00000471037 AP1M2Q9Y6Q5 423 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 CREBBPQ92793 2442 aa8.72□□□□□ -1.01
SF3A1-206ENST00000471037 PEX12O00623 359 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 OR1I1O60431 355 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 VPS26AO75436 327 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 OR2B3O76000 313 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 SYF2O95926 243 aaKnown RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 F7P08709 466 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 GSTM1P09488 218 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 OR56A5P0C7T3 313 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 CBSLP0DN79 551 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 ATP1B2P14415 290 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 STMN1P16949 149 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 FDXRP22570 491 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 CRABP2P29373 138 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 TYK2P29597 1187 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 FMO4P31512 558 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 CBSP35520 551 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 FOLR3P41439 243 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 MAGEA12P43365 314 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 TAS2R39P59534 338 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 RAB10P61026 200 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 DCDP81605 110 aaKnown RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 GSTM4Q03013 218 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 ELOAQ14241 798 aaKnown RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 USP10Q14694 798 aaKnown RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 ZKSCAN8Q15776 578 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 TTMPQ5BVD1 217 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 CTSL3PQ5NE16 218 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 RBM20Q5T481 1227 aaKnown RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 HECTD2Q5U5R9 776 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 UGT3A1Q6NUS8 523 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 MRPL14Q6P1L8 145 aaKnown RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 ZNF549Q6P9A3 640 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 CYP4X1Q8N118 509 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 C19orf47Q8N9M1 422 aaKnown RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 TFGQ92734 400 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 KCNJ9Q92806 393 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 NACC2Q96BF6 587 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 ARL8AQ96BM9 186 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 ALKBH8Q96BT7 664 aaKnown RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 TLCD1Q96CP7 247 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 CABS1Q96KC9 395 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 PANX3Q96QZ0 392 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 FERD3LQ96RJ6 166 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 SMC6Q96SB8 1091 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 NDNQ99608 321 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 NRTNQ99748 197 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 TSSK1BQ9BXA7 367 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 ILKAPQ9H0C8 392 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 POPDC3Q9HBV1 291 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 FAM60AQ9NP50 221 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 SNX15Q9NRS6 342 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 P4HTMQ9NXG6 502 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 TAS2R13Q9NYV9 303 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 ACTR10Q9NZ32 417 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 SLC39A10Q9ULF5 831 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 NOVA2Q9UNW9 492 aaKnown RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 SRPK3Q9UPE1 567 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 VWA7Q9Y334 891 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 PTRH2Q9Y3E5 179 aaKnown RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 PCDHGA10Q9Y5H3 936 aa8.71□□□□□ -1.02
SF3A1-206ENST00000471037 COPG1Q9Y678 874 aaKnown RBP8.71□□□□□ -1.02
SF3A1-206ENST00000471037 SPTBP11277 2137 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms