RNA–Protein interactions for RNA: ENST00000469852.5

COL9A3-209, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 901 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-209ENST00000469852 GTF2H2Q13888 395 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 C3orf38Q5JPI3 329 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 GTF2H2CQ6P1K8 395 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 SLCO4C1Q6ZQN7 724 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 RAB11FIP2Q7L804 512 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 ADCK2Q7Z695 626 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 TMPRSS11BQ86T26 416 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 KMT5CQ86Y97 462 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 DNAJC22Q8N4W6 341 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 ANKRD42Q8N9B4 389 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 AGBL5Q8NDL9 886 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 ZNF740Q8NDX6 193 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 RDH11Q8TC12 318 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 ZNF483Q8TF39 744 aaPredicted RBP14.19□□□□□ -0.14
COL9A3-209ENST00000469852 C1QTNF3Q9BXJ4 246 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 STRADBQ9C0K7 418 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 APMAPQ9HDC9 416 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 OXSMQ9NWU1 459 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 PILRAQ9UKJ1 303 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 SATB2Q9UPW6 733 aa14.19□□□□□ -0.14
COL9A3-209ENST00000469852 CCDC187A0A096LP49 1063 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 FEZF1A0PJY2 475 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 OR7A17O14581 309 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 DHRS4L1P0CG22 281 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 IMPDH1P20839 514 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 WDR4P57081 412 aaKnown RBP14.18□□□□□ -0.14
COL9A3-209ENST00000469852 HERVK_113P63132 956 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 DOC2AQ14183 400 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 CES4AQ5XG92 561 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 FRMPD2BQ6IN97 320 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 FBXO42Q6P3S6 717 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 FOXR1Q6PIV2 292 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 NXPE4Q6UWF7 544 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 FAM129CQ86XR2 697 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 SLC22A9Q8IVM8 553 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 ABHD11Q8NFV4 315 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 OR4K1Q8NGD4 311 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 OR52B6Q8NGF0 335 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 ZUFSPQ96AP4 578 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 L3HYPDHQ96EM0 354 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 TCTN2Q96GX1 697 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 CTRCQ99895 268 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 SELENOSQ9BQE4 189 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 SCNM1Q9BWG6 230 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 ERVK-6Q9BXR3 956 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 GSTO2Q9H4Y5 243 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 PDE7BQ9NP56 450 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 SEMA4BQ9NPR2 832 aaPredicted RBP14.18□□□□□ -0.14
COL9A3-209ENST00000469852 TMEM184CQ9NVA4 438 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 TNPO3Q9Y5L0 923 aaKnown RBP14.18□□□□□ -0.14
COL9A3-209ENST00000469852 KCNE2Q9Y6J6 123 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 SPTBP11277 2137 aa14.18□□□□□ -0.14
COL9A3-209ENST00000469852 LOC105369274A0A096LPK9 316 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 LOC102723532A0A0G2JNH3 316 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 A0A0J9YVX5 310 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 H3BQF6 201 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 TMX2-CTNND1H3BSU7 103 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 PLD2O14939 933 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 TM9SF1O15321 606 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 LCMT2O60294 686 aaKnown RBP14.17□□□□□ -0.14
COL9A3-209ENST00000469852 SUPT7LO94864 414 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 ZWINTO95229 277 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 STATHP02808 62 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 BPGMP07738 259 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 EPB42P16452 691 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 GNAZP19086 355 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 HPDP32754 393 aaPredicted RBP14.17□□□□□ -0.14
COL9A3-209ENST00000469852 BCL6P41182 706 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 SERPINB4P48594 390 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 ARL4DP49703 201 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 NAGLUP54802 743 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 REEP5Q00765 189 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 CYP4F3Q08477 520 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 TRAF3Q13114 568 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 CHIT1Q13231 466 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 ATG14Q6ZNE5 492 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 ZCCHC23Q6ZST2 131 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 RNF44Q7L0R7 432 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 OR4N4Q8N0Y3 316 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 CCNYL1Q8N7R7 359 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 GOLGA6L1Q8N7Z2 621 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 OR1L3Q8NH93 324 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 MDM1Q8TC05 714 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 MGARPQ8TDB4 240 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 ZNF501Q96CX3 271 aaPredicted RBP14.17□□□□□ -0.14
COL9A3-209ENST00000469852 CDK15Q96Q40 435 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 OR6C1Q96RD1 312 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 CMKLR1Q99788 373 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 GATA5Q9BWX5 397 aaPredicted RBP14.17□□□□□ -0.14
COL9A3-209ENST00000469852 CHRNA10Q9GZZ6 450 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 ACBD3Q9H3P7 528 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 NOL11Q9H8H0 719 aaKnown RBP14.17□□□□□ -0.14
COL9A3-209ENST00000469852 IPPKQ9H8X2 491 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 PELI2Q9HAT8 420 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 GPRC5BQ9NZH0 403 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 ANKMY1Q9P2S6 941 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 PISDQ9UG56 409 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 ZNF225Q9UK10 706 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 SNX7Q9UNH6 387 aa14.17□□□□□ -0.14
COL9A3-209ENST00000469852 ANGPTL3Q9Y5C1 460 aa14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms