RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 BCKDHBP21953 392 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 HNRNPA2B1P22626 353 aaKnown RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 PSMA3P25788 255 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CNTFP26441 200 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CRABP2P29373 138 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 AVPR2P30518 371 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 NSG1P42857 185 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 MAGEA9P43362 315 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 DHPSP49366 369 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 SELENOPP49908 381 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 SERPINB8P50452 374 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CLCN5P51795 746 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CTSCP53634 463 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 LIMK2P53671 638 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CDKN2DP55273 166 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 B4GALNT1Q00973 533 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 DPTQ07507 201 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ABRQ12979 859 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CSHL1Q14406 222 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ITIH4Q14624 930 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ELAVL1Q15717 326 aaKnown RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 TYSND1Q2T9J0 566 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 FAM214AQ32MH5 1076 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 KHDC1Q4VXA5 237 aaKnown RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 TAF1BQ53T94 588 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF542PQ5EBM4 170 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CTSL3PQ5NE16 218 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 LDLRAP1Q5SW96 308 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 LCE5AQ5TCM9 118 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 NXNQ6DKJ4 435 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 TTC19Q6DKK2 380 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 FAM45BPQ6NSW5 357 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 NEK5Q6P3R8 708 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ZNF449Q6P9G9 518 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 Q6ZSR6 202 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 KIAA0408Q6ZU52 694 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ADGRG6Q86SQ4 1221 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 TRABD2AQ86V40 505 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 PIM3Q86V86 326 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 HEATR4Q86WZ0 1026 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 TDRPQ86YL5 185 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 TRAPPC5Q8IUR0 188 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 C1orf210Q8IVY1 113 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CEP97Q8IW35 865 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CNTN4Q8IWV2 1026 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CFAP206Q8IYR0 622 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 RBFAQ8N0V3 343 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 RIBC1Q8N443 379 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 PRR18Q8N4B5 295 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 RASGEF1AQ8N9B8 481 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CFAP61Q8NHU2 1237 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 FAM45AQ8TCE6 357 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 LKAAEAR1Q8TD35 194 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 SKA2Q8WVK7 121 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ELMO1Q92556 727 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 LPGAT1Q92604 370 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 INPP5DQ92835 1189 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 GLYATL1Q969I3 302 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 TSACCQ96A04 125 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 FUBP1Q96AE4 644 aaKnown RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 CENPTQ96BT3 561 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 BIRC7Q96CA5 298 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 NXNL1Q96CM4 212 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 MTBPQ96DY7 904 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 PGM2Q96G03 612 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 BMFQ96LC9 184 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 GPR21Q99679 349 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 SH3GL2Q99962 352 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 WDR26Q9H7D7 661 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 PPCSQ9HAB8 311 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 MRPL40Q9NQ50 206 aaKnown RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 SNX15Q9NRS6 342 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 PHPT1Q9NRX4 125 aaPredicted RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 INTS10Q9NVR2 710 aaKnown RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 KCTD5Q9NXV2 234 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 DLGAP2Q9P1A6 1054 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ATXN10Q9UBB4 475 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 FETUBQ9UGM5 382 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 LGALS13Q9UHV8 139 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 EIF2B4Q9UI10 523 aaKnown RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 TRMT6Q9UJA5 497 aaKnown RBP3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 GNPTGQ9UJJ9 305 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 DNAJC16Q9Y2G8 782 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 ACOT9Q9Y305 439 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 PLEKHM1Q9Y4G2 1056 aa3.99□□□□□ -1.77
TMEM39A-204ENST00000468545 A0A087X1B8 175 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TRBV5-4A0A0C4DH59 114 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 A0A1W2PPC4 97 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TMEM202A6NGA9 273 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 CAPN14A8MX76 684 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 F8W8V4 182 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 PRAMEF26H0Y7S4 382 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 H3BMM5 538 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 GRID2O43424 1007 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 LATO43561 262 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 SNX2O60749 519 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TOP3BO95985 862 aaKnown RBP3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 SOD1P00441 154 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 TNFP01375 233 aa3.98□□□□□ -1.77
TMEM39A-204ENST00000468545 FTH1P02794 183 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms