RNA–Protein interactions for RNA: ENST00000467558.5

BRAT1-203, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 5

Gene BRAT1, Length 4,440 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-203ENST00000467558 SNAPC1Q16533 368 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 SLC44A4Q53GD3 710 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 NOXRED1Q6NXP6 359 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 SLC34A3Q8N130 599 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 ISG20Q96AZ6 181 aaKnown RBP13.39□□□□□ -0.27
BRAT1-203ENST00000467558 SLC7A6OSQ96CW6 309 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-203ENST00000467558 ADAP2Q9NPF8 381 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 DNAAF2Q9NVR5 837 aaKnown RBP13.39□□□□□ -0.27
BRAT1-203ENST00000467558 RHBDL2Q9NX52 303 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.39□□□□□ -0.27
BRAT1-203ENST00000467558 CENPXA8MT69 81 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 HHLA1C9JL84 531 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 DBTP11182 482 aaKnown RBP13.39□□□□□ -0.27
BRAT1-203ENST00000467558 HSD3B1P14060 373 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 RPS3P23396 243 aaKnown RBP eCLIP13.39□□□□□ -0.27
BRAT1-203ENST00000467558 HSD3B2P26439 372 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 SLC13A2Q13183 592 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 ATP1A4Q13733 1029 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 KLHL12Q53G59 568 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 ABHD13Q7L211 337 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 RANBP3LQ86VV4 465 aaPredicted RBP13.39□□□□□ -0.27
BRAT1-203ENST00000467558 COX18Q8N8Q8 333 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 NODALQ96S42 347 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 GPATCH1Q9BRR8 931 aaKnown RBP13.39□□□□□ -0.27
BRAT1-203ENST00000467558 IGSF5Q9NSI5 407 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 HCFC1R1Q9NWW0 138 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 PTGFRNQ9P2B2 879 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 PDE10AQ9Y233 779 aa13.39□□□□□ -0.27
BRAT1-203ENST00000467558 A0A0J9YVX5 310 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 TNFRSF10BO14763 440 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 AHCYL1O43865 530 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 H6PDO95479 791 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 PRSS56P0CW18 603 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 MAPK11Q15759 364 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 RTL4Q6ZR62 310 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 SMYD1Q8NB12 490 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 KDM1BQ8NB78 822 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 OR4E2Q8NGC2 313 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 ZNF563Q8TA94 476 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 METTL21AQ8WXB1 218 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 ZUFSPQ96AP4 578 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 FAM83CQ9BQN1 747 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 RSPH9Q9H1X1 276 aaPredicted RBP13.38□□□□□ -0.27
BRAT1-203ENST00000467558 AIG1Q9NVV5 245 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 MARCH5Q9NX47 278 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 PLK4O00444 970 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 SCN2BO60939 215 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 C1GALT1C1LP0DN25 315 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 PTGR1Q14914 329 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 TICAM1Q8IUC6 712 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 RTP3Q9BQQ7 232 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 TOR4AQ9NXH8 423 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 DPPA5A6NC42 116 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 NPC1O15118 1278 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 ALPPL2P10696 532 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 C6P13671 934 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 ALDH4A1P30038 563 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 AVPR1BP47901 424 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 SH3BP2P78314 561 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 RNF220Q5VTB9 566 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 FGD2Q7Z6J4 655 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 ZFAND4Q86XD8 727 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 CNTN4Q8IWV2 1026 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 OR52B6Q8NGF0 335 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 COL21A1Q96P44 957 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 PKP2Q99959 881 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 BOCQ9BWV1 1114 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 SSR3Q9UNL2 185 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 DLGAP4Q9Y2H0 992 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 KLF8O95600 359 aaPredicted RBP13.38□□□□□ -0.27
BRAT1-203ENST00000467558 ETS2P15036 469 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 CSNK2BP67870 215 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 CDK6Q00534 326 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 NANOGP8Q6NSW7 305 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 ERMP1Q7Z2K6 904 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 RTN4RL1Q86UN2 441 aaPredicted RBP13.38□□□□□ -0.27
BRAT1-203ENST00000467558 PIGXQ8TBF5 258 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 CAMK1GQ96NX5 476 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 NECTIN4Q96NY8 510 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 DEPDC7Q96QD5 511 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 CNPPD1Q9BV87 410 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 NANOGQ9H9S0 305 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 STMN3Q9NZ72 180 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 P2RX2Q9UBL9 471 aa13.38□□□□□ -0.27
BRAT1-203ENST00000467558 GON4LQ3T8J9 2241 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 CREG1O75629 220 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 ZBTB11O95625 1053 aaPredicted RBP13.37□□□□□ -0.27
BRAT1-203ENST00000467558 GNSP15586 552 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 GCAP28676 217 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 CASP9P55211 416 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 ROR2Q01974 943 aaKnown RBP13.37□□□□□ -0.27
BRAT1-203ENST00000467558 SEMA3BQ13214 749 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 TOMM20Q15388 145 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 NEK10Q6ZWH5 1172 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 FAM220AQ7Z4H9 259 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 CACTIN-AS1Q8N1I8 211 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 GTPBP3Q969Y2 492 aaKnown RBP13.37□□□□□ -0.27
BRAT1-203ENST00000467558 BIRC7Q96CA5 298 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 HDHD2Q9H0R4 259 aa13.37□□□□□ -0.27
BRAT1-203ENST00000467558 PCTPQ9UKL6 214 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms