RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 H2AFJQ9BTM1 129 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 DPH7Q9BTV6 452 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 SLC29A3Q9BZD2 475 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 PARVBQ9HBI1 364 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 LRRC4CQ9HCJ2 640 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 TAC3Q9UHF0 121 aa13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 DMGDHQ9UI17 866 aaKnown RBP13.46□□□□□ -0.25
CCHCR1-211ENST00000467553 A0A0J9YVX5 310 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 TCRBV9S1A1TA0A576 114 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 PABPN1LA6NDY0 278 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 PEX12O00623 359 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 SLC16A5O15375 505 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 CTSVO60911 334 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 KLF7O75840 302 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 IPO13O94829 963 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 ALPPP05187 535 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 GSTA2P09210 222 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 PIM1P11309 404 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 IMPA1P29218 277 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 SLC12A2P55011 1212 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 SOX8P57073 446 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 VSX2P58304 361 aaPredicted RBP13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 TAS2R39P59534 338 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 PRDX1Q06830 199 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 CHAF1BQ13112 559 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 ZNF460Q14592 562 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 VWA5B1Q5TIE3 1220 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 MLIPQ5VWP3 458 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 TMEM207Q6UWW9 146 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 MBOAT1Q6ZNC8 495 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 CLEC1AQ8NC01 280 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 VPS39Q96JC1 886 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 SELENOSQ9BQE4 189 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 NDC1Q9BTX1 674 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 TRIM54Q9BYV2 358 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 ATG10Q9H0Y0 220 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 RHOJQ9H4E5 214 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 SLAMF7Q9NQ25 335 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 ENAMQ9NRM1 1142 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 TXLNGQ9NUQ3 528 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 DHCR7Q9UBM7 475 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 NDOR1Q9UHB4 597 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 MTO1Q9Y2Z2 717 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 SPTBN1Q01082 2364 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 ESPL1Q14674 2120 aa13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 SPTAN1Q13813 2472 aaKnown RBP13.45□□□□□ -0.26
CCHCR1-211ENST00000467553 CCDC88CQ9P219 2028 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 FAM159BA6NKW6 160 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 ZSCAN9O15535 394 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 NRP2O60462 931 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 CCNDBP1O95273 360 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 TSPAN12O95859 305 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 EIF2S1P05198 315 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 FOLR3P41439 243 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 ARSFP54793 590 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 SP140Q13342 867 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 USP10Q14694 798 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 PHKG1Q16816 387 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 NADK2Q4G0N4 442 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 WASHC2DQ5SRD0 308 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 YOD1Q5VVQ6 348 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 ICE2Q659A1 982 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 FBXO42Q6P3S6 717 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 IGFL3Q6UXB1 125 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 CYS1Q717R9 158 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 ADCK2Q7Z695 626 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 LRRC56Q8IYG6 542 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 NKAPQ8N5F7 415 aaKnown RBP13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 PPM1NQ8N819 430 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 OR2Y1Q8NGV0 311 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 FBF1Q8TES7 1133 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 TM9SF4Q92544 642 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 PTERQ96BW5 349 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 GBP5Q96PP8 586 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 CPNE1Q99829 537 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 NUDT9Q9BW91 350 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 PHACTR1Q9C0D0 580 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 SLC6A20Q9NP91 592 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 ZDHHC18Q9NUE0 388 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 STOX2Q9P2F5 926 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 IFT80Q9P2H3 777 aaPredicted RBP13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 HEATR5BQ9P2D3 2071 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 SHANK1Q9Y566 2161 aa13.44□□□□□ -0.26
CCHCR1-211ENST00000467553 LOC105369274A0A096LPK9 316 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 LOC102723532A0A0G2JNH3 316 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 SRPX2O60687 465 aaPredicted RBP13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 FAM155BO75949 473 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 GUCA1CO95843 209 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 DDAH2O95865 285 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 ONECUT2O95948 504 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 ALBP02768 609 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 ABATP80404 500 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 NAE1Q13564 534 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 ATP1A4Q13733 1029 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 NAA25Q14CX7 972 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 INPP5JQ15735 1006 aaPredicted RBP13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 KBTBD12Q3ZCT8 623 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 GLE1Q53GS7 698 aaKnown RBP13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 TCTE1Q5JU00 501 aa13.43□□□□□ -0.26
CCHCR1-211ENST00000467553 FRMPD2BQ6IN97 320 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms