RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 ZNF480Q8WV37 535 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 METTL21AQ8WXB1 218 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 C8orf44Q96CB5 159 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 ZBTB20Q9HC78 741 aaPredicted RBP16.69■□□□□ 0.26
COL7A1-206ENST00000466591 MKKSQ9NPJ1 570 aaPredicted RBP16.69■□□□□ 0.26
COL7A1-206ENST00000466591 IARS2Q9NSE4 1012 aaKnown RBP16.69■□□□□ 0.26
COL7A1-206ENST00000466591 KLHL42Q9P2K6 505 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 FBXO5Q9UKT4 447 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 NOVA2Q9UNW9 492 aaKnown RBP16.69■□□□□ 0.26
COL7A1-206ENST00000466591 FER1L5A0AVI2 2057 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 PCSK5Q92824 1860 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 CCDC88CQ9P219 2028 aa16.69■□□□□ 0.26
COL7A1-206ENST00000466591 PTPN13Q12923 2485 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 VSTM2BA6NLU5 285 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 FFAR3O14843 346 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 GPR42O15529 346 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 WFS1O76024 890 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 HIST1H2AGP0C0S8 130 aaPredicted RBP16.68■□□□□ 0.26
COL7A1-206ENST00000466591 ERGP11308 486 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 PGAM1P18669 254 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 HIST1H2ADP20671 130 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 GRK3P35626 688 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 FNTAP49354 379 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 EMP3P54852 163 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 AP2B1P63010 937 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 MPP1Q00013 466 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 GARNL3Q5VVW2 1013 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 FBXO42Q6P3S6 717 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 FAM180AQ6UWF9 173 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 CUZD1Q86UP6 607 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 PAQR7Q86WK9 346 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 MYO1HQ8N1T3 1032 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 HIST1H2AHQ96KK5 128 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 C10orf90Q96M02 699 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 HIST1H2AJQ99878 128 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 H2AFJQ9BTM1 129 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 PTGFRNQ9P2B2 879 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 DHRS7Q9Y394 339 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 PCDHGA10Q9Y5H3 936 aa16.68■□□□□ 0.26
COL7A1-206ENST00000466591 A0A0A6YYC8 382 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-206ENST00000466591 IDSB3KWA1 339 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 E7ENX8 843 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 H7BY64 318 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 I3L1I5 382 aaPredicted RBP16.67■□□□□ 0.26
COL7A1-206ENST00000466591 TAP2Q03519 686 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 PRTGQ2VWP7 1150 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 CRB2Q5IJ48 1285 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 NDUFAF7Q7L592 441 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 PIWIL4Q7Z3Z4 852 aaKnown RBP16.67■□□□□ 0.26
COL7A1-206ENST00000466591 PCGF5Q86SE9 256 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 PLD3Q8IV08 490 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 ASB11Q8WXH4 323 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 PRAP1Q96NZ9 151 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 OSBPL9Q96SU4 736 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 NDNQ99608 321 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 SLC30A3Q99726 388 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 PCBD2Q9H0N5 130 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 RIC8BQ9NVN3 520 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 TAS2R13Q9NYV9 303 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 SLC5A6Q9Y289 635 aa16.67■□□□□ 0.26
COL7A1-206ENST00000466591 ZCWPW2A0A1B0GU75 182 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 PCDH17O14917 1159 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 HAT1O14929 419 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 HAUS5O94927 633 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 MED26O95402 600 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 TTC4O95801 387 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 STATHP02808 62 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 C8GP07360 202 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 MYBL2P10244 700 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 FDXRP22570 491 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 HRH2P25021 359 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 SKIV2L2P42285 1042 aaKnown RBP16.66■□□□□ 0.26
COL7A1-206ENST00000466591 RPS15AP62244 130 aaKnown RBP16.66■□□□□ 0.26
COL7A1-206ENST00000466591 MFAP5Q13361 173 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 CYP1B1Q16678 543 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 MINDY4Q4G0A6 757 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 NUP210LQ5VU65 1888 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 B3GNTL1Q67FW5 361 aaPredicted RBP16.66■□□□□ 0.26
COL7A1-206ENST00000466591 SLC35F6Q8N357 371 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 FBXO15Q8NCQ5 510 aaPredicted RBP16.66■□□□□ 0.26
COL7A1-206ENST00000466591 GIMAP7Q8NHV1 300 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 SUN3Q8TAQ9 357 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 CD200R1Q8TD46 325 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 AARSD1Q9BTE6 412 aaKnown RBP16.66■□□□□ 0.26
COL7A1-206ENST00000466591 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP16.66■□□□□ 0.26
COL7A1-206ENST00000466591 ENAMQ9NRM1 1142 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 MKL2Q9ULH7 1088 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 CSAG2Q9Y5P2 127 aa16.66■□□□□ 0.26
COL7A1-206ENST00000466591 EIF3FO00303 357 aaPredicted RBP16.65■□□□□ 0.26
COL7A1-206ENST00000466591 CBX6O95503 412 aa16.65■□□□□ 0.26
COL7A1-206ENST00000466591 PER3P56645 1201 aa16.65■□□□□ 0.26
COL7A1-206ENST00000466591 TBPL1P62380 186 aa16.65■□□□□ 0.26
COL7A1-206ENST00000466591 PDAP1Q13442 181 aaKnown RBP16.65■□□□□ 0.26
COL7A1-206ENST00000466591 CRYMQ14894 314 aa16.65■□□□□ 0.26
COL7A1-206ENST00000466591 SPANXN3Q5MJ09 141 aa16.65■□□□□ 0.26
COL7A1-206ENST00000466591 ZNF549Q6P9A3 640 aa16.65■□□□□ 0.26
COL7A1-206ENST00000466591 C17orf64Q86WR6 236 aa16.65■□□□□ 0.26
COL7A1-206ENST00000466591 TBC1D19Q8N5T2 526 aa16.65■□□□□ 0.26
COL7A1-206ENST00000466591 SIRT6Q8N6T7 355 aa16.65■□□□□ 0.26
COL7A1-206ENST00000466591 NAT8LQ8N9F0 302 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms