RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 PRSS35Q8N3Z0 413 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 KLHL5Q96PQ7 755 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 NDNQ99608 321 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 ATG101Q9BSB4 218 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 SRD5A3Q9H8P0 318 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 CNIH4Q9P003 139 aa3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 C19orf25Q9UFG5 118 aaPredicted RBP3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 RUVBL2Q9Y230 463 aaKnown RBP3.95□□□□□ -1.78
CDC42BPA-211ENST00000466538 TRAV18A0A075B6X5 111 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 C17orf105B2RV13 164 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 FAM72CH0Y354 149 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 ZNF197O14709 1029 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 ST8SIA3O43173 380 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 CIDEAO60543 219 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 LMX1BO60663 402 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 RTN2O75298 545 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 CRCPO75575 148 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 EML2O95834 649 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 PAK4O96013 591 aaPredicted RBP3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 IGLV2-11P01706 119 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 CD27P26842 260 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 CASP3P42574 277 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 NKX2-1P43699 371 aaPredicted RBP3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 MYL7Q01449 175 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 CDR2Q01850 454 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 ARHGAP1Q07960 439 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 TEFQ10587 303 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 RCN2Q14257 317 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 TEAD2Q15562 447 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 FAM72AQ5TYM5 149 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 FAM72DQ6L9T8 149 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 C18orf65Q6ZTR6 163 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 PIGZQ86VD9 579 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 FAM72BQ86X60 149 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 CREBRFQ8IUR6 639 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 CCDC60Q8IWA6 550 aaPredicted RBP3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 CCDC63Q8NA47 563 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 HPSE2Q8WWQ2 592 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 METTL21AQ8WXB1 218 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 GIMAP5Q96F15 307 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 LMLNQ96KR4 655 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 INPP4AQ96PE3 977 aaPredicted RBP3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 UHRF2Q96PU4 802 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 C17orf62Q9BQA9 187 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 RIMS4Q9H426 269 aaPredicted RBP3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 PPANQ9NQ55 473 aaKnown RBP3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 INTS9Q9NV88 658 aaKnown RBP3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 ZNF624Q9P2J8 865 aaPredicted RBP3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 GPR132Q9UNW8 380 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 KLK4Q9Y5K2 254 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 SNX5Q9Y5X3 404 aa3.94□□□□□ -1.78
CDC42BPA-211ENST00000466538 TRBV5-5A0A0J9YX44 114 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 C13orf42A0A1B0GVH6 325 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 CLPTM1O96005 669 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 ERVK-10P10266 1014 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 CYP2A7P20853 494 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 LHCGRP22888 699 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 PIK3R1P27986 724 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 HNF4AP41235 474 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 FOLH1Q04609 750 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 CETN1Q12798 172 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 P2RY6Q15077 328 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 IQCCQ4KMZ1 466 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 CEACAM20Q6UY09 585 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 PRUNE1Q86TP1 453 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 KIRREL3Q8IZU9 778 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 CARNMT1Q8N4J0 409 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 NIPA2Q8N8Q9 360 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 TRIM58Q8NG06 486 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 OR7A2PQ8NGA2 310 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 PSMA8Q8TAA3 256 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 C4orf45Q96LM5 186 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 DOCK7Q96N67 2140 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 TSSK2Q96PF2 358 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 CCDC3Q9BQI4 270 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 SHARPINQ9H0F6 387 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 RNF121Q9H920 327 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 SIX2Q9NPC8 291 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 PDRG1Q9NUG6 133 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 OR6C2Q9NZP2 312 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 IL36AQ9UHA7 158 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 SLC12A6Q9UHW9 1150 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 KCNJ14Q9UNX9 436 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 TNNQ9UQP3 1299 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 TCF19Q9Y242 345 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 ITM2BQ9Y287 266 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 KNSTRNQ9Y448 316 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 R4GN57 208 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 ACEP12821 1306 aa3.93□□□□□ -1.78
CDC42BPA-211ENST00000466538 FAM149AA5PLN7 773 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 TRIM64A6NGJ6 449 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 TRIM64BA6NI03 449 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 PRSS46E5RG02 174 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 PRSS44E7EML9 344 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 BLOC1S5-TXNDC5H3BN57 136 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 CTDSPLO15194 276 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 SCO2O43819 266 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 SLC22A3O75751 556 aa3.92□□□□□ -1.78
CDC42BPA-211ENST00000466538 DDHD2O94830 711 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms