RNA–Protein interactions for RNA: ENST00000466154.5

SLX4-202, Transcript of SLX4 structure-specific endonuclease subunit, humanhuman

TSL 1 (best)

Gene SLX4, Length 3,228 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4-202ENST00000466154 TCAIMQ8N3R3 496 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 OR5AK3PQ8NH89 298 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 CLP1Q92989 425 aaKnown RBP15.82■□□□□ 0.12
SLX4-202ENST00000466154 ZSWIM3Q96MP5 696 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 ZNF641Q96N77 438 aaPredicted RBP15.82■□□□□ 0.12
SLX4-202ENST00000466154 NODALQ96S42 347 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 TMEM121BQ9BXQ6 578 aaPredicted RBP15.82■□□□□ 0.12
SLX4-202ENST00000466154 ASPSCR1Q9BZE9 553 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 BLOC1S6Q9UL45 172 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 SLC1A7O00341 560 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 TGFB1P01137 390 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 CTSLP07711 333 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 RETP07949 1114 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 DCKP27707 260 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 VIPR1P32241 457 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 CATSPEREQ5SY80 951 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.82■□□□□ 0.12
SLX4-202ENST00000466154 PIWIL3Q7Z3Z3 882 aaKnown RBP15.82■□□□□ 0.12
SLX4-202ENST00000466154 CSGALNACT1Q8TDX6 532 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 DUSP26Q9BV47 211 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 PLGRKTQ9HBL7 147 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 AMBNQ9NP70 447 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 SPASTQ9UBP0 616 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 SAMD4AQ9UPU9 718 aaKnown RBP15.82■□□□□ 0.12
SLX4-202ENST00000466154 ERVW-1Q9UQF0 538 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 GMPPBQ9Y5P6 360 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 MICAL3Q7RTP6 2002 aa15.82■□□□□ 0.12
SLX4-202ENST00000466154 TRBV5-3A0A0A0MS03 114 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 GNRH1P01148 92 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 FABP3P05413 133 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 HNRNPCP07910 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
SLX4-202ENST00000466154 CTSAP10619 480 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 PSMB9P28065 219 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 TTKP33981 857 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 RPS13P62277 151 aaKnown RBP15.81■□□□□ 0.12
SLX4-202ENST00000466154 XAF1Q6GPH4 301 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 OR2T5Q6IEZ7 315 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 OR2T29Q8NH02 315 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 SAMD11Q96NU1 681 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 ZBP1Q9H171 429 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 TPT1P8Q9HAU6 139 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 STOX2Q9P2F5 926 aaPredicted RBP15.81■□□□□ 0.12
SLX4-202ENST00000466154 FZD4Q9ULV1 537 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 FADS2O95864 444 aaKnown RBP15.81■□□□□ 0.12
SLX4-202ENST00000466154 CATP04040 527 aaKnown RBP15.81■□□□□ 0.12
SLX4-202ENST00000466154 CLTBP09497 229 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 TMEM115Q12893 351 aaPredicted RBP15.81■□□□□ 0.12
SLX4-202ENST00000466154 VMACQ2NL98 169 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 PLEKHS1Q5SXH7 462 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 CPTPQ5TA50 214 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 OR13F1Q8NGS4 319 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 ZFYVE19Q96K21 471 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 FOPNLQ96NB1 174 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 FUNDC2Q9BWH2 189 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 PAK6Q9NQU5 681 aaPredicted RBP15.81■□□□□ 0.12
SLX4-202ENST00000466154 PAK1IP1Q9NWT1 392 aaPredicted RBP15.81■□□□□ 0.12
SLX4-202ENST00000466154 ERVK-18Q9QC07 812 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 ACSL6Q9UKU0 697 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 ABHD14A-ACY1A0A1B0GW23 586 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 GFYI3L273 518 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 WNT9AO14904 365 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 CCNDBP1O95273 360 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 RHOP08100 348 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 TIMP2P16035 220 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 PTPN6P29350 595 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 OR1E2P47887 323 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 NRIP1P48552 1158 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 C21orf59P57076 290 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 SKIV2LQ15477 1246 aaKnown RBP15.81■□□□□ 0.12
SLX4-202ENST00000466154 CPZQ66K79 652 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 Q6ZPB1 254 aaPredicted RBP15.81■□□□□ 0.12
SLX4-202ENST00000466154 HIPK1Q86Z02 1210 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 HUS1BQ8NHY5 278 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 GIPC3Q8TF64 312 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 OR4K3Q96R72 315 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 PKP4Q99569 1192 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 CPEB1Q9BZB8 566 aaKnown RBP15.81■□□□□ 0.12
SLX4-202ENST00000466154 OR2AG1Q9H205 316 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 OR51B5Q9H339 312 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 TMEFF2Q9UIK5 374 aaPredicted RBP15.81■□□□□ 0.12
SLX4-202ENST00000466154 PLAGL1Q9UM63 463 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 TESMINQ9Y4I5 508 aa15.81■□□□□ 0.12
SLX4-202ENST00000466154 GABRR3A8MPY1 467 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 HTR1AP08908 422 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 KDELR2P33947 212 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 PPM1AP35813 382 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 DGKEP52429 567 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 AP1S2P56377 157 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 MC1RQ01726 317 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 COL9A2Q14055 689 aaPredicted RBP15.8■□□□□ 0.12
SLX4-202ENST00000466154 TBC1D25Q3MII6 688 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 TCEAL5Q5H9L2 206 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 RBM48Q5RL73 367 aaKnown RBP15.8■□□□□ 0.12
SLX4-202ENST00000466154 LRIF1Q5T3J3 769 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 ELMSAN1Q6PJG2 1045 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 GRASPQ7Z6J2 395 aaPredicted RBP15.8■□□□□ 0.12
SLX4-202ENST00000466154 L3MBTL4Q8NA19 623 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 OR4A15Q8NGL6 344 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 ADAMTS16Q8TE57 1224 aa15.8■□□□□ 0.12
SLX4-202ENST00000466154 NEIL2Q969S2 332 aa15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms