RNA–Protein interactions for RNA: ENST00000464867.1

APP-213, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best)

Gene APP, Length 816 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-213ENST00000464867 PRPF4O43172 522 aaKnown RBP eCLIP8.87□□□□□ -0.99
APP-213ENST00000464867 MMP2P08253 660 aa8.87□□□□□ -0.99
APP-213ENST00000464867 CD53P19397 219 aa8.87□□□□□ -0.99
APP-213ENST00000464867 SOX5P35711 763 aa8.87□□□□□ -0.99
APP-213ENST00000464867 TNNT3P45378 269 aaPredicted RBP8.87□□□□□ -0.99
APP-213ENST00000464867 GALNT2Q10471 571 aa8.87□□□□□ -0.99
APP-213ENST00000464867 PKP1Q13835 747 aa8.87□□□□□ -0.99
APP-213ENST00000464867 FASTKQ14296 549 aaKnown RBP8.87□□□□□ -0.99
APP-213ENST00000464867 KIR2DS3Q14952 304 aa8.87□□□□□ -0.99
APP-213ENST00000464867 BTBD16Q32M84 506 aa8.87□□□□□ -0.99
APP-213ENST00000464867 FILIP1LQ4L180 1135 aa8.87□□□□□ -0.99
APP-213ENST00000464867 BCL7AQ4VC05 210 aa8.87□□□□□ -0.99
APP-213ENST00000464867 FCRLBQ6BAA4 426 aa8.87□□□□□ -0.99
APP-213ENST00000464867 PRSS57Q6UWY2 283 aa8.87□□□□□ -0.99
APP-213ENST00000464867 WDR53Q7Z5U6 358 aaPredicted RBP8.87□□□□□ -0.99
APP-213ENST00000464867 DAAM2Q86T65 1068 aa8.87□□□□□ -0.99
APP-213ENST00000464867 TFGQ92734 400 aaPredicted RBP8.87□□□□□ -0.99
APP-213ENST00000464867 FATE1Q969F0 183 aa8.87□□□□□ -0.99
APP-213ENST00000464867 TIGD1Q96MW7 591 aa8.87□□□□□ -0.99
APP-213ENST00000464867 NRTNQ99748 197 aa8.87□□□□□ -0.99
APP-213ENST00000464867 SELENOSQ9BQE4 189 aa8.87□□□□□ -0.99
APP-213ENST00000464867 BHLHE41Q9C0J9 482 aaPredicted RBP8.87□□□□□ -0.99
APP-213ENST00000464867 THAP2Q9H0W7 228 aa8.87□□□□□ -0.99
APP-213ENST00000464867 TRABDQ9H4I3 376 aa8.87□□□□□ -0.99
APP-213ENST00000464867 STAU2Q9NUL3 570 aaKnown RBP eCLIP8.87□□□□□ -0.99
APP-213ENST00000464867 C14orf105Q9NVL8 296 aa8.87□□□□□ -0.99
APP-213ENST00000464867 SPHK1Q9NYA1 384 aa8.87□□□□□ -0.99
APP-213ENST00000464867 CAMSAP3Q9P1Y5 1249 aaPredicted RBP8.87□□□□□ -0.99
APP-213ENST00000464867 TRPC4Q9UBN4 977 aa8.87□□□□□ -0.99
APP-213ENST00000464867 RWDD2AQ9UIY3 292 aa8.87□□□□□ -0.99
APP-213ENST00000464867 CDC14AQ9UNH5 594 aa8.87□□□□□ -0.99
APP-213ENST00000464867 ATP6V1DQ9Y5K8 247 aa8.87□□□□□ -0.99
APP-213ENST00000464867 LOC102723996A0A087X1L8 192 aa8.86□□□□□ -0.99
APP-213ENST00000464867 FAM47E-STBD1D6RA91 191 aa8.86□□□□□ -0.99
APP-213ENST00000464867 AURKAO14965 403 aa8.86□□□□□ -0.99
APP-213ENST00000464867 PHF1O43189 567 aaPredicted RBP8.86□□□□□ -0.99
APP-213ENST00000464867 SRPX2O60687 465 aaPredicted RBP8.86□□□□□ -0.99
APP-213ENST00000464867 SLC25A12O75746 678 aa8.86□□□□□ -0.99
APP-213ENST00000464867 MAGP20916 626 aa8.86□□□□□ -0.99
APP-213ENST00000464867 MCM3P25205 808 aa8.86□□□□□ -0.99
APP-213ENST00000464867 ARSEP51690 589 aa8.86□□□□□ -0.99
APP-213ENST00000464867 MAMLD1Q13495 774 aa8.86□□□□□ -0.99
APP-213ENST00000464867 BOP1Q14137 746 aaKnown RBP8.86□□□□□ -0.99
APP-213ENST00000464867 KRT81Q14533 505 aa8.86□□□□□ -0.99
APP-213ENST00000464867 DPY19L2P1Q6NXN4 242 aa8.86□□□□□ -0.99
APP-213ENST00000464867 BEND4Q6ZU67 534 aa8.86□□□□□ -0.99
APP-213ENST00000464867 YTHDF3Q7Z739 585 aaKnown RBP8.86□□□□□ -0.99
APP-213ENST00000464867 RPRMLQ8N4K4 120 aa8.86□□□□□ -0.99
APP-213ENST00000464867 LILRA3Q8N6C8 439 aaPredicted RBP8.86□□□□□ -0.99
APP-213ENST00000464867 CCNYQ8ND76 341 aa8.86□□□□□ -0.99
APP-213ENST00000464867 ZNF398Q8TD17 642 aa8.86□□□□□ -0.99
APP-213ENST00000464867 PIGTQ969N2 578 aa8.86□□□□□ -0.99
APP-213ENST00000464867 TMEM125Q96AQ2 219 aa8.86□□□□□ -0.99
APP-213ENST00000464867 IMMP1LQ96LU5 166 aa8.86□□□□□ -0.99
APP-213ENST00000464867 TSGA13Q96PP4 275 aa8.86□□□□□ -0.99
APP-213ENST00000464867 TRIB3Q96RU7 358 aa8.86□□□□□ -0.99
APP-213ENST00000464867 PLEKHF2Q9H8W4 249 aa8.86□□□□□ -0.99
APP-213ENST00000464867 VPS37BQ9H9H4 285 aa8.86□□□□□ -0.99
APP-213ENST00000464867 SMOXQ9NWM0 555 aa8.86□□□□□ -0.99
APP-213ENST00000464867 POLG2Q9UHN1 485 aa8.86□□□□□ -0.99
APP-213ENST00000464867 TDRKHQ9Y2W6 561 aaKnown RBP8.86□□□□□ -0.99
APP-213ENST00000464867 PKP3Q9Y446 797 aa8.86□□□□□ -0.99
APP-213ENST00000464867 CUBNO60494 3623 aa8.85□□□□□ -0.99
APP-213ENST00000464867 IGLV3-12A0A075B6K2 115 aa8.85□□□□□ -0.99
APP-213ENST00000464867 FITM1A5D6W6 292 aa8.85□□□□□ -0.99
APP-213ENST00000464867 MEGF11A6BM72 1044 aa8.85□□□□□ -0.99
APP-213ENST00000464867 TRIM64A6NGJ6 449 aa8.85□□□□□ -0.99
APP-213ENST00000464867 TUBAL3A6NHL2 446 aa8.85□□□□□ -0.99
APP-213ENST00000464867 TRIM64BA6NI03 449 aa8.85□□□□□ -0.99
APP-213ENST00000464867 GABRR3A8MPY1 467 aa8.85□□□□□ -0.99
APP-213ENST00000464867 KLRC4-KLRK1H3BQV0 150 aa8.85□□□□□ -0.99
APP-213ENST00000464867 SYT5O00445 386 aa8.85□□□□□ -0.99
APP-213ENST00000464867 NME2P1O60361 137 aa8.85□□□□□ -0.99
APP-213ENST00000464867 GOSR1O95249 250 aa8.85□□□□□ -0.99
APP-213ENST00000464867 NDST3O95803 873 aa8.85□□□□□ -0.99
APP-213ENST00000464867 C8orf89P0DMQ9 161 aa8.85□□□□□ -0.99
APP-213ENST00000464867 TFEBP19484 476 aa8.85□□□□□ -0.99
APP-213ENST00000464867 NME2P22392 152 aa8.85□□□□□ -0.99
APP-213ENST00000464867 ACVR2AP27037 513 aa8.85□□□□□ -0.99
APP-213ENST00000464867 PCK1P35558 622 aa8.85□□□□□ -0.99
APP-213ENST00000464867 GRIA3P42263 894 aa8.85□□□□□ -0.99
APP-213ENST00000464867 VSX2P58304 361 aaPredicted RBP8.85□□□□□ -0.99
APP-213ENST00000464867 TAS2R50P59544 299 aa8.85□□□□□ -0.99
APP-213ENST00000464867 RPA4Q13156 261 aa8.85□□□□□ -0.99
APP-213ENST00000464867 MUM1Q2TAK8 710 aa8.85□□□□□ -0.99
APP-213ENST00000464867 WASHC2DQ5SRD0 308 aa8.85□□□□□ -0.99
APP-213ENST00000464867 PLAG1Q6DJT9 500 aa8.85□□□□□ -0.99
APP-213ENST00000464867 PPP1R2P3Q6NXS1 205 aa8.85□□□□□ -0.99
APP-213ENST00000464867 H3F3CQ6NXT2 135 aa8.85□□□□□ -0.99
APP-213ENST00000464867 FDX2Q6P4F2 183 aa8.85□□□□□ -0.99
APP-213ENST00000464867 B3GNT6Q6ZMB0 384 aa8.85□□□□□ -0.99
APP-213ENST00000464867 CYP4V2Q6ZWL3 525 aaPredicted RBP8.85□□□□□ -0.99
APP-213ENST00000464867 CXorf67Q86X51 503 aaPredicted RBP8.85□□□□□ -0.99
APP-213ENST00000464867 CRLF3Q8IUI8 442 aa8.85□□□□□ -0.99
APP-213ENST00000464867 MCOLN2Q8IZK6 566 aa8.85□□□□□ -0.99
APP-213ENST00000464867 SLC5A8Q8N695 610 aa8.85□□□□□ -0.99
APP-213ENST00000464867 SLC22A18Q96BI1 424 aa8.85□□□□□ -0.99
APP-213ENST00000464867 TTYH2Q9BSA4 534 aa8.85□□□□□ -0.99
APP-213ENST00000464867 YIPF4Q9BSR8 244 aa8.85□□□□□ -0.99
APP-213ENST00000464867 OR52A5Q9H2C5 316 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms