RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 DLGAP4Q9Y2H0 992 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 SLC45A1Q9Y2W3 748 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 PCDHGB3Q9Y5G1 929 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 RAI2Q9Y5P3 530 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 ANKRD12Q6UB98 2062 aa7.08□□□□□ -1.28
USP48-206ENST00000464577 CHD5Q8TDI0 1954 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 A0A0U1RQS6 177 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SLC12A8A0AV02 714 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SERTM1A2A2V5 107 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 IQCF5A8MTL0 148 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 A8MVJ9 347 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 FAM25AB3EWG3 89 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 FAM25CB3EWG5 89 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 FAM25GB3EWG6 89 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SSX4O60224 188 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 PRMT3O60678 531 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SEMA3DO95025 777 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 DIRAS1O95057 198 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 EPN2O95208 641 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CLDN9O95484 217 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 PTHP01270 115 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 PRKCAP17252 672 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CTPS1P17812 591 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ITGB6P18564 788 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SDC1P18827 310 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CA5AP35218 305 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CPT1AP50416 773 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 GNG2P59768 71 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CSTF3Q12996 717 aaKnown RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 BOP1Q14137 746 aaKnown RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 E2F2Q14209 437 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 BCL7AQ4VC05 210 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SLC39A12Q504Y0 691 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SGO1Q5FBB7 561 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CDKL4Q5MAI5 379 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ZNF772Q68DY9 489 aaPredicted RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 PTRHD1Q6GMV3 140 aaKnown RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 NADSYN1Q6IA69 706 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 NEK5Q6P3R8 708 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 MOB2Q70IA6 237 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ANKRD46Q86W74 232 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 KRT73Q86Y46 540 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 GALNT12Q8IXK2 581 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CYP4Z2PQ8N1L4 340 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SYNPOQ8N3V7 929 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 STX19Q8N4C7 294 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 MYEOVQ96EZ4 313 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 FCRL1Q96LA6 429 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CEP19Q96LK0 163 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CHCHD6Q9BRQ6 235 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CDCA4Q9BXL8 241 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 RNF38Q9H0F5 515 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 GPBP1L1Q9HC44 474 aaPredicted RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 SMURF1Q9HCE7 757 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 DYRK4Q9NR20 520 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ASAH2Q9NR71 780 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ADARB2Q9NS39 739 aaKnown RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 ABI2Q9NYB9 513 aaPredicted RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 TAS2R9Q9NYW1 312 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 GPRC5BQ9NZH0 403 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 POFUT2Q9Y2G5 429 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 PADI2Q9Y2J8 665 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 PCDHGA2Q9Y5H1 932 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 MAU2Q9Y6X3 613 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SLC35F4A4IF30 521 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 EFCAB10A6NFE3 127 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ANKRD66B4E2M5 251 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 F5H5T6 163 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 CLIC1O00299 241 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ARHGAP33O14559 1287 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 KIAA0513O60268 411 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 GUCA1CO95843 209 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 POMCP01189 267 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 VIPP01282 170 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 F11P03951 625 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 STSP08842 583 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ANXA8P13928 327 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ZNF7P17097 686 aaPredicted RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 ENGP17813 658 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 PRPS1L1P21108 318 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 GJA5P36382 358 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 KIR3DL1P43629 444 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ALDH9A1P49189 494 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 KCNJ10P78508 379 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SRSF11Q05519 484 aaKnown RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 PCDH1Q08174 1060 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 NFE2Q16621 373 aaPredicted RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 HKDC1Q2TB90 917 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SOWAHCQ53LP3 525 aaPredicted RBP7.07□□□□□ -1.28
USP48-206ENST00000464577 GNASQ5JWF2 1037 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 NXNL2Q5VZ03 156 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 SPRYD7Q5W111 196 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 OR4F3Q6IEY1 312 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 GPR153Q6NV75 609 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 NRARPQ7Z6K4 114 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 ZNF605Q86T29 641 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 FAM124AQ86V42 546 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 TCAIMQ8N3R3 496 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 EFHBQ8N7U6 833 aa7.07□□□□□ -1.28
USP48-206ENST00000464577 OR7D4Q8NG98 312 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms